c2pfam

AT5G43520.1 :

Domain Description Evalue Bits GA Start End
zf-HC5HC2H_2 PHD-zinc-finger like domain 7.8E-06 15 27.00 16 65
C1_2 C1 domain 1.1E-12 38 20.40 19 65
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 1.4E-06 18 26.00 28 68
zf-HC5HC2H PHD-like zinc-binding domain 5E-05 13 29.10 31 66
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 4.2E-06 16 27.30 35 67
DZR Double zinc ribbon 0.12 2 27.30 35 46
PHD PHD-finger 0.00015 11 27.90 38 102
zf-RING-like RING-like domain 3.1E-05 14 21.60 38 68
zf-HC5HC2H_2 PHD-zinc-finger like domain 2.5E-08 23 27.00 60 128
zf-HC5HC2H PHD-like zinc-binding domain 5.7E-08 22 29.10 62 145
C1_2 C1 domain 4.5E-16 48 20.40 75 123
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.00026 10 27.30 94 123
DZR Double zinc ribbon 0.00015 11 27.30 95 124
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 1.4E-05 14 26.00 96 123
PHD PHD-finger 4.7E-05 13 27.90 97 147
zf-RING-like RING-like domain 0.021 5 21.60 97 123
C1_2 C1 domain 4.3E-10 29 20.40 134 185
DZR Double zinc ribbon 0.0051 6 27.30 150 179
zf-HC5HC2H PHD-like zinc-binding domain 1 -1 29.10 153 190
zf-HC5HC2H_2 PHD-zinc-finger like domain 0.39 0 27.00 153 187
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 4.8E-05 13 26.00 155 186
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.0034 6 27.30 155 186
PHD PHD-finger 0.00033 10 27.90 156 194
zf-RING-like RING-like domain 0.24 1 21.60 156 183
HD-ZIP_N HD-ZIP protein N terminus 0.00011 12 21.70 190 214

250

zf-HC5HC2H_2
C1_2
C1_1
zf-HC5HC2H
Zn_ribbon_17
DZR
PHD
zf-RING-like
zf-HC5HC2H_2
zf-HC5HC2H
C1_2
Zn_ribbon_17
DZR
C1_1
PHD
zf-RING-like
C1_2
DZR
zf-HC5HC2H
zf-HC5HC2H_2
C1_1
Zn_ribbon_17
PHD
zf-RING-like
HD-ZIP_N

References:

Zn_ribbon_17

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

DZR

HD-ZIP_N

zf-RING-like

zf-HC5HC2H_2

zf-HC5HC2H

C1_2

C1_1
1862342 Crystal structure of the catalytic subunit of cyclic adenosine monophosphate-dependent protein kinase. Science. 1991;253:407-414.

Domain	Description	Evalue	Bits	GA	Start	End
zf-HC5HC2H_2	PHD-zinc-finger like domain	7.8E-06	15	27.00	16	65
C1_2	C1 domain	1.1E-12	38	20.40	19	65
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	1.4E-06	18	26.00	28	68
zf-HC5HC2H	PHD-like zinc-binding domain	5E-05	13	29.10	31	66
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	4.2E-06	16	27.30	35	67
DZR	Double zinc ribbon	0.12	2	27.30	35	46
PHD	PHD-finger	0.00015	11	27.90	38	102
zf-RING-like	RING-like domain	3.1E-05	14	21.60	38	68
zf-HC5HC2H_2	PHD-zinc-finger like domain	2.5E-08	23	27.00	60	128
zf-HC5HC2H	PHD-like zinc-binding domain	5.7E-08	22	29.10	62	145
C1_2	C1 domain	4.5E-16	48	20.40	75	123
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.00026	10	27.30	94	123
DZR	Double zinc ribbon	0.00015	11	27.30	95	124
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	1.4E-05	14	26.00	96	123
PHD	PHD-finger	4.7E-05	13	27.90	97	147
zf-RING-like	RING-like domain	0.021	5	21.60	97	123
C1_2	C1 domain	4.3E-10	29	20.40	134	185
DZR	Double zinc ribbon	0.0051	6	27.30	150	179
zf-HC5HC2H	PHD-like zinc-binding domain	1	-1	29.10	153	190
zf-HC5HC2H_2	PHD-zinc-finger like domain	0.39	0	27.00	153	187
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	4.8E-05	13	26.00	155	186
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.0034	6	27.30	155	186
PHD	PHD-finger	0.00033	10	27.90	156	194
zf-RING-like	RING-like domain	0.24	1	21.60	156	183
HD-ZIP_N	HD-ZIP protein N terminus	0.00011	12	21.70	190	214