c2pfam

AT5G44160.1 :

Domain Description Evalue Bits GA Start End
zf-H2C2_2 Zinc-finger double domain 0.023 4 40.00 64 75
zf-MYST MYST family zinc finger domain 0.026 3 28.80 66 86
zf-C2H2_4 C2H2-type zinc finger 9.1E-05 12 27.00 66 88
zf-C2H2_6 C2H2-type zinc finger 2.7E-05 13 25.00 66 88
zf-C2H2 Zinc finger, C2H2 type 8.9E-06 15 20.80 67 88
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 3E-06 17 22.60 68 88
zf-met Zinc-finger of C2H2 type 9E-05 12 21.20 68 88
zf-H2C2_2 Zinc-finger double domain 0.33 1 40.00 80 110
zf-H2C2_2 Zinc-finger double domain 0.00021 11 40.00 130 151
zf-MYST MYST family zinc finger domain 0.036 3 28.80 141 164
zf-met Zinc-finger of C2H2 type 0.31 1 21.20 142 160
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 0.025 4 22.60 142 160
zf-C2H2 Zinc finger, C2H2 type 0.0018 8 20.80 143 162
zf-C2H2_4 C2H2-type zinc finger 0.0055 7 27.00 143 163
zf-C2H2_6 C2H2-type zinc finger 0.27 1 25.00 144 163
zf-C2H2 Zinc finger, C2H2 type 0.00064 9 20.80 165 187
zf-C2H2_4 C2H2-type zinc finger 0.012 6 27.00 169 187
zf-met Zinc-finger of C2H2 type 0.49 0 21.20 173 186

466

zf-H2C2_2
zf-MYST
zf-C2H2_4
zf-C2H2_6
zf-C2H2
zf-C2H2_jaz
zf-met
zf-H2C2_2
zf-H2C2_2
zf-MYST
zf-met
zf-C2H2_jaz
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2
zf-C2H2_4
zf-met

References:

zf-C2H2_6

zf-H2C2_2

zf-MYST

zf-C2H2_4

zf-met

zf-C2H2
9171100 Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins. Nucleic Acids Res 1997;25:2464-2469.
12683994 Assessment by molecular dynamics simulations of the structural determinants of DNA-binding specificity for transcription factor Sp1. J Mol Biol 2003;328:9-32.

zf-C2H2_jaz
10488071 JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization. J Biol Chem. 1999;274:27399-27406.

Domain	Description	Evalue	Bits	GA	Start	End
zf-H2C2_2	Zinc-finger double domain	0.023	4	40.00	64	75
zf-MYST	MYST family zinc finger domain	0.026	3	28.80	66	86
zf-C2H2_4	C2H2-type zinc finger	9.1E-05	12	27.00	66	88
zf-C2H2_6	C2H2-type zinc finger	2.7E-05	13	25.00	66	88
zf-C2H2	Zinc finger, C2H2 type	8.9E-06	15	20.80	67	88
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	3E-06	17	22.60	68	88
zf-met	Zinc-finger of C2H2 type	9E-05	12	21.20	68	88
zf-H2C2_2	Zinc-finger double domain	0.33	1	40.00	80	110
zf-H2C2_2	Zinc-finger double domain	0.00021	11	40.00	130	151
zf-MYST	MYST family zinc finger domain	0.036	3	28.80	141	164
zf-met	Zinc-finger of C2H2 type	0.31	1	21.20	142	160
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	0.025	4	22.60	142	160
zf-C2H2	Zinc finger, C2H2 type	0.0018	8	20.80	143	162
zf-C2H2_4	C2H2-type zinc finger	0.0055	7	27.00	143	163
zf-C2H2_6	C2H2-type zinc finger	0.27	1	25.00	144	163
zf-C2H2	Zinc finger, C2H2 type	0.00064	9	20.80	165	187
zf-C2H2_4	C2H2-type zinc finger	0.012	6	27.00	169	187
zf-met	Zinc-finger of C2H2 type	0.49	0	21.20	173	186