c2pfam

AT5G44460.1 :

Domain Description Evalue Bits GA Start End
EF-hand_4 Cytoskeletal-regulatory complex EF hand 1.6E-05 15 21.30 3 53
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.0049 7 21.40 9 51
EF-hand_8 EF-hand domain pair 9.7E-05 12 28.00 24 53
EF-hand_7 EF-hand domain pair 2E-10 31 30.00 28 87
EF-hand_1 EF hand 4.3E-11 32 25.40 29 55
EF-hand_6 EF-hand domain 1.8E-11 33 25.00 29 57
EF-hand_5 EF hand 1.1E-09 27 25.90 31 51
EF-hand_9 EF-hand domain 0.00042 11 37.00 31 70
Caleosin Caleosin related protein 2E-05 14 20.60 31 66
EF-hand_14 EF-hand domain 3E-05 14 23.70 31 78
Dockerin_1 Dockerin type I repeat 0.27 1 20.50 37 45
EF-hand_8 EF-hand domain pair 0.00011 12 28.00 41 65
SAP SAP domain 0.0035 7 22.60 45 59
UBA_6 UBA-like domain 0.02 5 23.50 47 62
EF-hand_8 EF-hand domain pair 0.00012 12 28.00 109 128
EF-hand_7 EF-hand domain pair 2.7E-16 50 30.00 110 175
Caleosin Caleosin related protein 0.0017 8 20.60 110 141
EF-hand_6 EF-hand domain 3.5E-11 32 25.00 111 140
EF-hand_1 EF hand 7E-11 31 25.40 111 139
EF-hand_5 EF hand 5.2E-09 25 25.90 112 135
Dockerin_1 Dockerin type I repeat 0.0047 7 20.50 113 139
EF-hand_9 EF-hand domain 1.1E-05 16 37.00 114 175
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.00081 10 21.40 115 170
EF-hand_14 EF-hand domain 0.0092 6 23.70 116 143
Dockerin_1 Dockerin type I repeat 0.0002 11 20.50 119 168
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.00065 10 21.30 122 176
EF-hand_8 EF-hand domain pair 3.9E-09 26 28.00 124 175
SAP SAP domain 0.00032 10 22.60 129 145
UBA_6 UBA-like domain 0.0046 7 23.50 130 144
EF-hand_1 EF hand 4.2E-09 26 25.40 150 176
EF-hand_5 EF hand 2.1E-06 17 25.90 157 174
EF-hand_6 EF-hand domain 1.5E-05 15 25.00 158 176

181

EF-hand_4
SPARC_Ca_bdg
EF-hand_8
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_9
Caleosin
EF-hand_14
Dockerin_1
EF-hand_8
SAP
UBA_6
EF-hand_8
EF-hand_7
Caleosin
EF-hand_6
EF-hand_1
EF-hand_5
Dockerin_1
EF-hand_9
SPARC_Ca_bdg
EF-hand_14
Dockerin_1
EF-hand_4
EF-hand_8
SAP
UBA_6
EF-hand_1
EF-hand_5
EF-hand_6

References:

EF-hand_9

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

EF-hand_7

EF-hand_6

EF-hand_5

EF-hand_4

EF-hand_14

EF-hand_1

EF-hand_8

UBA_6

Caleosin
11171180 New insights into the mechanisms of lipid-body biogenesis in plants and other organisms. Biochem Soc Trans 2000;28:710-711.

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

SAP
10694879 SAP - a putative DNA-binding motif involved in chromosomal organization. Trends Biochem Sci 2000;25:112-114.
16797182 Conserved ribonuclease, Eri1, negatively regulates heterochromatin assembly in fission yeast. Curr Biol. 2006;16:1459-1464.

Domain	Description	Evalue	Bits	GA	Start	End
EF-hand_4	Cytoskeletal-regulatory complex EF hand	1.6E-05	15	21.30	3	53
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.0049	7	21.40	9	51
EF-hand_8	EF-hand domain pair	9.7E-05	12	28.00	24	53
EF-hand_7	EF-hand domain pair	2E-10	31	30.00	28	87
EF-hand_1	EF hand	4.3E-11	32	25.40	29	55
EF-hand_6	EF-hand domain	1.8E-11	33	25.00	29	57
EF-hand_5	EF hand	1.1E-09	27	25.90	31	51
EF-hand_9	EF-hand domain	0.00042	11	37.00	31	70
Caleosin	Caleosin related protein	2E-05	14	20.60	31	66
EF-hand_14	EF-hand domain	3E-05	14	23.70	31	78
Dockerin_1	Dockerin type I repeat	0.27	1	20.50	37	45
EF-hand_8	EF-hand domain pair	0.00011	12	28.00	41	65
SAP	SAP domain	0.0035	7	22.60	45	59
UBA_6	UBA-like domain	0.02	5	23.50	47	62
EF-hand_8	EF-hand domain pair	0.00012	12	28.00	109	128
EF-hand_7	EF-hand domain pair	2.7E-16	50	30.00	110	175
Caleosin	Caleosin related protein	0.0017	8	20.60	110	141
EF-hand_6	EF-hand domain	3.5E-11	32	25.00	111	140
EF-hand_1	EF hand	7E-11	31	25.40	111	139
EF-hand_5	EF hand	5.2E-09	25	25.90	112	135
Dockerin_1	Dockerin type I repeat	0.0047	7	20.50	113	139
EF-hand_9	EF-hand domain	1.1E-05	16	37.00	114	175
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.00081	10	21.40	115	170
EF-hand_14	EF-hand domain	0.0092	6	23.70	116	143
Dockerin_1	Dockerin type I repeat	0.0002	11	20.50	119	168
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.00065	10	21.30	122	176
EF-hand_8	EF-hand domain pair	3.9E-09	26	28.00	124	175
SAP	SAP domain	0.00032	10	22.60	129	145
UBA_6	UBA-like domain	0.0046	7	23.50	130	144
EF-hand_1	EF hand	4.2E-09	26	25.40	150	176
EF-hand_5	EF hand	2.1E-06	17	25.90	157	174
EF-hand_6	EF-hand domain	1.5E-05	15	25.00	158	176