c2pfam

AT5G44560.1 :

Domain Description Evalue Bits GA Start End
GAS Growth-arrest specific micro-tubule binding 1.2E-05 14 32.30 14 156
Snf7 Snf7 2.1E-36 114 20.80 18 185
YlqD YlqD protein 1.8E-06 17 27.00 18 86
Cep57_MT_bd Centrosome microtubule-binding domain of Cep57 2.3E-05 14 31.30 20 71
DUF4407 Domain of unknown function (DUF4407) 0.001 7 31.30 40 161
MerR-DNA-bind MerR, DNA binding 5.1E-05 13 21.70 53 84
Flagellin_C Bacterial flagellin C-terminal helical region 0.042 3 22.20 64 87
DUF4407 Domain of unknown function (DUF4407) 0.012 4 31.30 109 218
YlqD YlqD protein 0.0079 6 27.00 114 154
Cep57_MT_bd Centrosome microtubule-binding domain of Cep57 0.024 4 31.30 122 150
Flagellin_C Bacterial flagellin C-terminal helical region 2.3E-05 14 22.20 126 182
MerR-DNA-bind MerR, DNA binding 0.18 1 21.70 134 169
MerR-DNA-bind MerR, DNA binding 0.51 0 21.70 209 220

222

GAS
Snf7
YlqD
Cep57_MT_bd
DUF4407
MerR-DNA-bind
Flagellin_C
DUF4407
YlqD
Cep57_MT_bd
Flagellin_C
MerR-DNA-bind
MerR-DNA-bind

References:

GAS

YlqD

DUF4407

Flagellin_C
7648320 Spinning tails. Curr Opin Struct Biol 1995;5:187-193.
2190210 Flagellin as an object for supramolecular engineering. Protein Eng 1990;3:411-413.

Cep57_MT_bd

MerR-DNA-bind
12958362 Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR. Science. 2003;301:1383-1387.

Snf7
12194857 Escrt-III: an endosome-associated heterooligomeric protein complex required for mvb sorting. Dev Cell 2002;3:271-282.
15469844 ESCRT-II, an endosome-associated complex required for protein sorting: crystal structure and interactions with ESCRT-III and membranes. Dev Cell 2004;7:559-569.
14583093 Structure and function of human Vps20 and Snf7 proteins. Biochem J 2004;377:693-700.

Domain	Description	Evalue	Bits	GA	Start	End
GAS	Growth-arrest specific micro-tubule binding	1.2E-05	14	32.30	14	156
Snf7	Snf7	2.1E-36	114	20.80	18	185
YlqD	YlqD protein	1.8E-06	17	27.00	18	86
Cep57_MT_bd	Centrosome microtubule-binding domain of Cep57	2.3E-05	14	31.30	20	71
DUF4407	Domain of unknown function (DUF4407)	0.001	7	31.30	40	161
MerR-DNA-bind	MerR, DNA binding	5.1E-05	13	21.70	53	84
Flagellin_C	Bacterial flagellin C-terminal helical region	0.042	3	22.20	64	87
DUF4407	Domain of unknown function (DUF4407)	0.012	4	31.30	109	218
YlqD	YlqD protein	0.0079	6	27.00	114	154
Cep57_MT_bd	Centrosome microtubule-binding domain of Cep57	0.024	4	31.30	122	150
Flagellin_C	Bacterial flagellin C-terminal helical region	2.3E-05	14	22.20	126	182
MerR-DNA-bind	MerR, DNA binding	0.18	1	21.70	134	169
MerR-DNA-bind	MerR, DNA binding	0.51	0	21.70	209	220