AT5G47430.1 :
Domain
Description
Evalue
Bits
GA
Start
End
DWNN
DWNN domain
5.8E-32
99
21.70
3
76
zf-CCHC_2
Zinc knuckle
1E-13
40
27.00
205
225
zf-CCHC
Zinc knuckle
0.00022
10
20.80
209
224
U-box
U-box domain
2.7E-06
17
21.40
290
358
zf-C3HC4_2
Zinc finger, C3HC4 type (RING finger)
0.00014
11
27.00
294
331
zf-RING_2
Ring finger domain
0.00041
10
27.30
294
331
zf-C3HC4
Zinc finger, C3HC4 type (RING finger)
0.00027
10
21.00
295
331
892
DWNN
zf-CCHC_2
zf-CCHC
U-box
zf-C3HC4_2
zf-RING_2
zf-C3HC4
References:
zf-CCHC
zf-C3HC4_2
zf-C3HC4
8804826
The RING finger domain: a recent example of a sequence-structure family.
Curr Opin Struct Biol 1996;6:395-401.
10500182
RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination.
Proc Natl Acad Sci U S A 1999;96:11364-11369.
U-box
10704423
The U box is a modified RING finger - a common domain in ubiquitination.
Curr Biol 2000;10:132-134.
zf-CCHC_2
zf-RING_2
DWNN
16396680
DWNN, a novel ubiquitin-like domain, implicates RBBP6 in mRNA processing and ubiquitin-like pathways.
BMC Struct Biol. 2006;6:1.