c2pfam

AT1G27190.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 2.2E-11 33 20.70 24 67
LRR_4 Leucine Rich repeats (2 copies) 1.7E-05 15 27.00 75 110
LRR_8 Leucine rich repeat 0.00024 10 27.00 88 108
LRR_6 Leucine Rich repeat 3.9E-05 13 23.40 95 111
LRR_4 Leucine Rich repeats (2 copies) 1.1E-07 22 27.00 97 133
LRR_1 Leucine Rich Repeat 0.00029 11 20.60 97 117
LRR_6 Leucine Rich repeat 0.00041 10 23.40 121 135
LRR_8 Leucine rich repeat 1.6E-09 27 27.00 121 181
LRR_1 Leucine Rich Repeat 0.012 6 20.60 123 138
LRR_6 Leucine Rich repeat 0.033 4 23.40 144 159
LRR_1 Leucine Rich Repeat 0.59 1 20.60 149 166
LRR_4 Leucine Rich repeats (2 copies) 1.9E-06 18 27.00 149 182
LRR_1 Leucine Rich Repeat 0.0097 6 20.60 170 189
LRR_6 Leucine Rich repeat 0.023 4 23.40 171 183
Protocadherin Protocadherin 9.8E-06 15 24.00 223 269
Pkinase Protein kinase domain 4.2E-27 84 20.40 320 574
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 1.2E-28 89 23.10 326 575
Glycos_transf_1 Glycosyl transferases group 1 0.00024 10 20.30 489 539

601

LRRNT_2
LRR_4
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_8
LRR_1
LRR_6
LRR_1
LRR_4
LRR_1
LRR_6
Protocadherin
Pkinase
PK_Tyr_Ser-Thr
Glycos_transf_1

References:

LRR_8

Glycos_transf_1

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_4

Protocadherin
8508762 Protocadherins: a large family of cadherin-related molecules in central nervous system. EMBO J 1993;12:2249-2256.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	2.2E-11	33	20.70	24	67
LRR_4	Leucine Rich repeats (2 copies)	1.7E-05	15	27.00	75	110
LRR_8	Leucine rich repeat	0.00024	10	27.00	88	108
LRR_6	Leucine Rich repeat	3.9E-05	13	23.40	95	111
LRR_4	Leucine Rich repeats (2 copies)	1.1E-07	22	27.00	97	133
LRR_1	Leucine Rich Repeat	0.00029	11	20.60	97	117
LRR_6	Leucine Rich repeat	0.00041	10	23.40	121	135
LRR_8	Leucine rich repeat	1.6E-09	27	27.00	121	181
LRR_1	Leucine Rich Repeat	0.012	6	20.60	123	138
LRR_6	Leucine Rich repeat	0.033	4	23.40	144	159
LRR_1	Leucine Rich Repeat	0.59	1	20.60	149	166
LRR_4	Leucine Rich repeats (2 copies)	1.9E-06	18	27.00	149	182
LRR_1	Leucine Rich Repeat	0.0097	6	20.60	170	189
LRR_6	Leucine Rich repeat	0.023	4	23.40	171	183
Protocadherin	Protocadherin	9.8E-06	15	24.00	223	269
Pkinase	Protein kinase domain	4.2E-27	84	20.40	320	574
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	1.2E-28	89	23.10	326	575
Glycos_transf_1	Glycosyl transferases group 1	0.00024	10	20.30	489	539