c2pfam

AT5G48630.1 :

Domain Description Evalue Bits GA Start End
LolA_2 Outer membrane lipoprotein carrier protein LolA 1.6E-05 13 26.80 8 54
Cyclin_N Cyclin, N-terminal domain 7.9E-26 79 20.50 17 142
DUF5402 Family of unknown function (DUF5402) 4.8E-05 12 25.00 29 78
TFIIB Transcription factor TFIIB repeat 3.8E-08 22 20.60 48 99
PRP38 PRP38 family 0.057 2 20.80 59 126
Cyclin_N Cyclin, N-terminal domain 0.0067 5 20.50 185 209
PRP38 PRP38 family 5.9E-05 12 20.80 187 227
TFIIB Transcription factor TFIIB repeat 0.017 4 20.60 193 203

253

LolA_2
Cyclin_N
DUF5402
TFIIB
PRP38
Cyclin_N
PRP38
TFIIB

References:

TFIIB

Cyclin_N
8152925 Evidence for a protein domain superfamily shared by the cyclins, TFIIB and RB/p107. Nucleic Acids Res 1994;22:946-952.
8591034 The crystal structure of cyclin A Structure. 1995;3:1235-1247.
8756328 Structural basis of cyclin-dependant kinase activation by phosphorylation. Nat Struct Biol. 1996;3:696-700.
2001396 Isolation and characterization of a human cDNA encoding uracil-DNA glycosylase. Biochim Biophys Acta 1991;1088:197-207.

LolA_2

DUF5402

PRP38
1508195 PRP38 encodes a yeast protein required for pre-mRNA splicing and maintenance of stable U6 small nuclear RNA levels. Mol Cell Biol 1992;12:3939-3947.
9582287 Progression through the spliceosome cycle requires Prp38p function for U4/U6 snRNA dissociation. EMBO J 1998;17:2938-2946.

Domain	Description	Evalue	Bits	GA	Start	End
LolA_2	Outer membrane lipoprotein carrier protein LolA	1.6E-05	13	26.80	8	54
Cyclin_N	Cyclin, N-terminal domain	7.9E-26	79	20.50	17	142
DUF5402	Family of unknown function (DUF5402)	4.8E-05	12	25.00	29	78
TFIIB	Transcription factor TFIIB repeat	3.8E-08	22	20.60	48	99
PRP38	PRP38 family	0.057	2	20.80	59	126
Cyclin_N	Cyclin, N-terminal domain	0.0067	5	20.50	185	209
PRP38	PRP38 family	5.9E-05	12	20.80	187	227
TFIIB	Transcription factor TFIIB repeat	0.017	4	20.60	193	203