c2pfam

AT5G48940.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.9E-10 30 20.70 38 77
LRR_4 Leucine Rich repeats (2 copies) 1.5E-06 18 27.00 106 147
LRR_8 Leucine rich repeat 1.4E-09 27 27.00 107 166
LRR_1 Leucine Rich Repeat 0.85 0 20.60 107 126
CUPID Cytohesin Ubiquitin Protein Inducing Domain 0.87 -1 22.40 107 126
LRR_1 Leucine Rich Repeat 0.0038 8 20.60 132 153
LRR_8 Leucine rich repeat 4.8E-05 13 27.00 148 190
CUPID Cytohesin Ubiquitin Protein Inducing Domain 0.0025 7 22.40 152 173
LRR_4 Leucine Rich repeats (2 copies) 2.1E-07 21 27.00 154 204
LRR_1 Leucine Rich Repeat 0.0025 8 20.60 155 175
LRR_4 Leucine Rich repeats (2 copies) 0.033 4 27.00 204 239
LRR_8 Leucine rich repeat 0.00021 10 27.00 224 258
LRR_4 Leucine Rich repeats (2 copies) 0.0011 9 27.00 228 261
LRR_4 Leucine Rich repeats (2 copies) 0.0047 7 27.00 252 289
LRR_8 Leucine rich repeat 0.0072 6 27.00 273 311
LRR_4 Leucine Rich repeats (2 copies) 0.01 6 27.00 276 309
LRR_4 Leucine Rich repeats (2 copies) 0.0062 7 27.00 299 339
LRR_8 Leucine rich repeat 1.5E-11 33 27.00 324 383
LRR_1 Leucine Rich Repeat 0.053 4 20.60 325 346
LRR_1 Leucine Rich Repeat 0.0051 7 20.60 348 370
LRR_4 Leucine Rich repeats (2 copies) 2.7E-07 20 27.00 348 386
LRR_4 Leucine Rich repeats (2 copies) 5.6E-05 13 27.00 394 434
LRR_1 Leucine Rich Repeat 1 0 20.60 394 416
LRR_8 Leucine rich repeat 4.1E-08 22 27.00 405 455
LRR_4 Leucine Rich repeats (2 copies) 2.9E-05 14 27.00 419 454
LRR_1 Leucine Rich Repeat 0.0021 8 20.60 420 438
LRR_4 Leucine Rich repeats (2 copies) 5E-05 13 27.00 444 479
LRR_4 Leucine Rich repeats (2 copies) 1.6E-06 18 27.00 467 504
LRR_8 Leucine rich repeat 2E-10 30 27.00 468 527
LRR_1 Leucine Rich Repeat 0.42 1 20.60 469 490
LRR_1 Leucine Rich Repeat 0.13 3 20.60 492 514
LRR_8 Leucine rich repeat 3.8E-09 26 27.00 512 551
LRR_4 Leucine Rich repeats (2 copies) 2E-08 24 27.00 516 554
CUPID Cytohesin Ubiquitin Protein Inducing Domain 0.94 -1 22.40 516 557
LRR_1 Leucine Rich Repeat 0.038 5 20.60 517 538
LRR_8 Leucine rich repeat 1.7E-06 17 27.00 525 574
LRR_8 Leucine rich repeat 5.3E-10 28 27.00 540 599
LRR_1 Leucine Rich Repeat 2.8E-05 14 20.60 540 562
LRR_8 Leucine rich repeat 2.8E-07 20 27.00 564 624
LRR_4 Leucine Rich repeats (2 copies) 1.6E-05 15 27.00 564 600
LRR_1 Leucine Rich Repeat 0.13 3 20.60 565 586
LRR_1 Leucine Rich Repeat 0.0038 8 20.60 588 606
LRR_1 Leucine Rich Repeat 0.0074 7 20.60 617 633
LRR_8 Leucine rich repeat 4.3E-09 25 27.00 617 671
LRR_4 Leucine Rich repeats (2 copies) 3.2E-08 23 27.00 637 671
LRR_1 Leucine Rich Repeat 0.11 3 20.60 638 653
LRR_1 Leucine Rich Repeat 0.013 6 20.60 660 678
Pkinase Protein kinase domain 0 143 20.40 787 1060
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 143 23.10 788 1062
Kinase-like Kinase-like 7.8E-05 11 25.00 902 1003
Pkinase_fungal Fungal protein kinase 8.7E-05 11 24.10 902 965

1135

LRRNT_2
LRR_4
LRR_8
LRR_1
CUPID
LRR_1
LRR_8
CUPID
LRR_4
LRR_1
LRR_4
LRR_8
LRR_4
LRR_4
LRR_8
LRR_4
LRR_4
LRR_8
LRR_1
LRR_1
LRR_4
LRR_4
LRR_1
LRR_8
LRR_4
LRR_1
LRR_4
LRR_4
LRR_8
LRR_1
LRR_1
LRR_8
LRR_4
CUPID
LRR_1
LRR_8
LRR_8
LRR_1
LRR_8
LRR_4
LRR_1
LRR_1
LRR_1
LRR_8
LRR_4
LRR_1
LRR_1
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Pkinase_fungal

References:

LRR_8

CUPID

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

Kinase-like

LRR_4

Pkinase_fungal

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.9E-10	30	20.70	38	77
LRR_4	Leucine Rich repeats (2 copies)	1.5E-06	18	27.00	106	147
LRR_8	Leucine rich repeat	1.4E-09	27	27.00	107	166
LRR_1	Leucine Rich Repeat	0.85	0	20.60	107	126
CUPID	Cytohesin Ubiquitin Protein Inducing Domain	0.87	-1	22.40	107	126
LRR_1	Leucine Rich Repeat	0.0038	8	20.60	132	153
LRR_8	Leucine rich repeat	4.8E-05	13	27.00	148	190
CUPID	Cytohesin Ubiquitin Protein Inducing Domain	0.0025	7	22.40	152	173
LRR_4	Leucine Rich repeats (2 copies)	2.1E-07	21	27.00	154	204
LRR_1	Leucine Rich Repeat	0.0025	8	20.60	155	175
LRR_4	Leucine Rich repeats (2 copies)	0.033	4	27.00	204	239
LRR_8	Leucine rich repeat	0.00021	10	27.00	224	258
LRR_4	Leucine Rich repeats (2 copies)	0.0011	9	27.00	228	261
LRR_4	Leucine Rich repeats (2 copies)	0.0047	7	27.00	252	289
LRR_8	Leucine rich repeat	0.0072	6	27.00	273	311
LRR_4	Leucine Rich repeats (2 copies)	0.01	6	27.00	276	309
LRR_4	Leucine Rich repeats (2 copies)	0.0062	7	27.00	299	339
LRR_8	Leucine rich repeat	1.5E-11	33	27.00	324	383
LRR_1	Leucine Rich Repeat	0.053	4	20.60	325	346
LRR_1	Leucine Rich Repeat	0.0051	7	20.60	348	370
LRR_4	Leucine Rich repeats (2 copies)	2.7E-07	20	27.00	348	386
LRR_4	Leucine Rich repeats (2 copies)	5.6E-05	13	27.00	394	434
LRR_1	Leucine Rich Repeat	1	0	20.60	394	416
LRR_8	Leucine rich repeat	4.1E-08	22	27.00	405	455
LRR_4	Leucine Rich repeats (2 copies)	2.9E-05	14	27.00	419	454
LRR_1	Leucine Rich Repeat	0.0021	8	20.60	420	438
LRR_4	Leucine Rich repeats (2 copies)	5E-05	13	27.00	444	479
LRR_4	Leucine Rich repeats (2 copies)	1.6E-06	18	27.00	467	504
LRR_8	Leucine rich repeat	2E-10	30	27.00	468	527
LRR_1	Leucine Rich Repeat	0.42	1	20.60	469	490
LRR_1	Leucine Rich Repeat	0.13	3	20.60	492	514
LRR_8	Leucine rich repeat	3.8E-09	26	27.00	512	551
LRR_4	Leucine Rich repeats (2 copies)	2E-08	24	27.00	516	554
CUPID	Cytohesin Ubiquitin Protein Inducing Domain	0.94	-1	22.40	516	557
LRR_1	Leucine Rich Repeat	0.038	5	20.60	517	538
LRR_8	Leucine rich repeat	1.7E-06	17	27.00	525	574
LRR_8	Leucine rich repeat	5.3E-10	28	27.00	540	599
LRR_1	Leucine Rich Repeat	2.8E-05	14	20.60	540	562
LRR_8	Leucine rich repeat	2.8E-07	20	27.00	564	624
LRR_4	Leucine Rich repeats (2 copies)	1.6E-05	15	27.00	564	600
LRR_1	Leucine Rich Repeat	0.13	3	20.60	565	586
LRR_1	Leucine Rich Repeat	0.0038	8	20.60	588	606
LRR_1	Leucine Rich Repeat	0.0074	7	20.60	617	633
LRR_8	Leucine rich repeat	4.3E-09	25	27.00	617	671
LRR_4	Leucine Rich repeats (2 copies)	3.2E-08	23	27.00	637	671
LRR_1	Leucine Rich Repeat	0.11	3	20.60	638	653
LRR_1	Leucine Rich Repeat	0.013	6	20.60	660	678
Pkinase	Protein kinase domain	0	143	20.40	787	1060
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	143	23.10	788	1062
Kinase-like	Kinase-like	7.8E-05	11	25.00	902	1003
Pkinase_fungal	Fungal protein kinase	8.7E-05	11	24.10	902	965