c2pfam

AT5G49480.1 :

Domain Description Evalue Bits GA Start End
EF-hand_6 EF-hand domain 1.9E-08 23 25.00 19 43
EF-hand_7 EF-hand domain pair 9.3E-14 41 30.00 20 80
EF-hand_5 EF hand 4.7E-09 25 25.90 22 42
EF-hand_1 EF hand 1.9E-08 23 25.40 22 43
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.0002 11 21.40 22 78
EF-hand_9 EF-hand domain 0.0057 6 37.00 23 81
EF-hand_8 EF-hand domain pair 3.8E-05 13 28.00 23 42
Dockerin_1 Dockerin type I repeat 3.5E-05 13 20.50 27 72
EF-hand_8 EF-hand domain pair 1.6E-07 20 28.00 30 81
EF-hand_1 EF hand 9.1E-09 24 25.40 59 83
EF-hand_5 EF hand 2.1E-07 20 25.90 62 80
EF-hand_6 EF-hand domain 5.5E-06 15 25.00 65 83
EF-hand_8 EF-hand domain pair 8.2E-06 15 28.00 95 123
EF-hand_6 EF-hand domain 2.9E-08 23 25.00 98 123
EF-hand_5 EF hand 3.8E-08 22 25.90 98 119
EF-hand_7 EF-hand domain pair 4.7E-10 29 30.00 98 157
EF-hand_1 EF hand 2.3E-09 26 25.40 98 123
EF-hand_9 EF-hand domain 0.0039 7 37.00 100 141
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.94 -1 21.40 102 119
Dockerin_1 Dockerin type I repeat 0.27 1 20.50 105 117
EF-hand_8 EF-hand domain pair 0.022 4 28.00 117 139
EF-hand_1 EF hand 0.95 -1 25.40 133 140

160

EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_1
SPARC_Ca_bdg
EF-hand_9
EF-hand_8
Dockerin_1
EF-hand_8
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_8
EF-hand_6
EF-hand_5
EF-hand_7
EF-hand_1
EF-hand_9
SPARC_Ca_bdg
Dockerin_1
EF-hand_8
EF-hand_1

References:

EF-hand_9

EF-hand_8

EF-hand_7

EF-hand_6

EF-hand_5

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

EF-hand_1

Domain	Description	Evalue	Bits	GA	Start	End
EF-hand_6	EF-hand domain	1.9E-08	23	25.00	19	43
EF-hand_7	EF-hand domain pair	9.3E-14	41	30.00	20	80
EF-hand_5	EF hand	4.7E-09	25	25.90	22	42
EF-hand_1	EF hand	1.9E-08	23	25.40	22	43
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.0002	11	21.40	22	78
EF-hand_9	EF-hand domain	0.0057	6	37.00	23	81
EF-hand_8	EF-hand domain pair	3.8E-05	13	28.00	23	42
Dockerin_1	Dockerin type I repeat	3.5E-05	13	20.50	27	72
EF-hand_8	EF-hand domain pair	1.6E-07	20	28.00	30	81
EF-hand_1	EF hand	9.1E-09	24	25.40	59	83
EF-hand_5	EF hand	2.1E-07	20	25.90	62	80
EF-hand_6	EF-hand domain	5.5E-06	15	25.00	65	83
EF-hand_8	EF-hand domain pair	8.2E-06	15	28.00	95	123
EF-hand_6	EF-hand domain	2.9E-08	23	25.00	98	123
EF-hand_5	EF hand	3.8E-08	22	25.90	98	119
EF-hand_7	EF-hand domain pair	4.7E-10	29	30.00	98	157
EF-hand_1	EF hand	2.3E-09	26	25.40	98	123
EF-hand_9	EF-hand domain	0.0039	7	37.00	100	141
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.94	-1	21.40	102	119
Dockerin_1	Dockerin type I repeat	0.27	1	20.50	105	117
EF-hand_8	EF-hand domain pair	0.022	4	28.00	117	139
EF-hand_1	EF hand	0.95	-1	25.40	133	140