c2pfam

AT5G49660.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.8E-09 27 20.70 29 68
LRR_8 Leucine rich repeat 7.5E-05 12 27.00 74 108
LRR_8 Leucine rich repeat 3.9E-06 16 27.00 96 157
LRR_4 Leucine Rich repeats (2 copies) 6.8E-06 16 27.00 96 137
LRR_1 Leucine Rich Repeat 0.014 6 20.60 97 117
LRR_4 Leucine Rich repeats (2 copies) 0.018 5 27.00 137 153
LRR_4 Leucine Rich repeats (2 copies) 9E-05 12 27.00 145 182
LRR_1 Leucine Rich Repeat 0.0024 8 20.60 146 167
LRR_8 Leucine rich repeat 0.00074 9 27.00 165 204
DUF5612 Domain of unknown function (DUF5612) 0.38 0 25.00 190 237
LRR_4 Leucine Rich repeats (2 copies) 0.016 5 27.00 213 235
LRR_8 Leucine rich repeat 7.5E-06 15 27.00 214 253
DUF5612 Domain of unknown function (DUF5612) 0.1 2 25.00 217 263
LRR_4 Leucine Rich repeats (2 copies) 4.2E-05 13 27.00 219 256
LRR_1 Leucine Rich Repeat 0.01 6 20.60 221 242
LRR_1 Leucine Rich Repeat 0.43 1 20.60 244 267
LRR_4 Leucine Rich repeats (2 copies) 1.6E-05 15 27.00 244 278
DUF5612 Domain of unknown function (DUF5612) 0.06 2 25.00 256 287
LRR_8 Leucine rich repeat 3E-07 19 27.00 265 304
LRR_1 Leucine Rich Repeat 0.047 4 20.60 269 291
LRR_8 Leucine rich repeat 2.1E-06 17 27.00 292 352
LRR_4 Leucine Rich repeats (2 copies) 5.9E-07 19 27.00 292 331
LRR_1 Leucine Rich Repeat 0.0012 9 20.60 293 314
LRR_8 Leucine rich repeat 0.018 4 27.00 317 353
LRR_1 Leucine Rich Repeat 0.042 4 20.60 318 336
LRR_1 Leucine Rich Repeat 0.85 0 20.60 345 361
LRR_4 Leucine Rich repeats (2 copies) 0.88 -1 27.00 369 404
LRR_4 Leucine Rich repeats (2 copies) 0.17 2 27.00 390 425
LRR_8 Leucine rich repeat 3.2E-07 19 27.00 393 448
DUF5612 Domain of unknown function (DUF5612) 0.27 0 25.00 406 454
LRR_1 Leucine Rich Repeat 0.073 3 20.60 417 434
LRR_8 Leucine rich repeat 1.8E-07 20 27.00 437 472
LRR_4 Leucine Rich repeats (2 copies) 2E-06 17 27.00 437 474
LRR_1 Leucine Rich Repeat 0.0024 8 20.60 461 478
DUF5612 Domain of unknown function (DUF5612) 0.011 5 25.00 479 527
LRR_1 Leucine Rich Repeat 0.022 5 20.60 482 507
LRR_8 Leucine rich repeat 5.2E-07 19 27.00 484 542
LRR_4 Leucine Rich repeats (2 copies) 3.7E-05 13 27.00 485 524
LRR_1 Leucine Rich Repeat 0.0061 7 20.60 510 531
Pkinase Protein kinase domain 0.049 2 20.40 590 659
Pkinase_fungal Fungal protein kinase 0.001 7 24.10 657 722
Pkinase Protein kinase domain 0 166 20.40 658 931
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 138 23.10 660 933
Pkinase_fungal Fungal protein kinase 0.00022 9 24.10 782 855

966

LRRNT_2
LRR_8
LRR_8
LRR_4
LRR_1
LRR_4
LRR_4
LRR_1
LRR_8
DUF5612
LRR_4
LRR_8
DUF5612
LRR_4
LRR_1
LRR_1
LRR_4
DUF5612
LRR_8
LRR_1
LRR_8
LRR_4
LRR_1
LRR_8
LRR_1
LRR_1
LRR_4
LRR_4
LRR_8
DUF5612
LRR_1
LRR_8
LRR_4
LRR_1
DUF5612
LRR_1
LRR_8
LRR_4
LRR_1
Pkinase
Pkinase_fungal
Pkinase
PK_Tyr_Ser-Thr
Pkinase_fungal

References:

LRR_8

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_4

DUF5612

Pkinase_fungal

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.8E-09	27	20.70	29	68
LRR_8	Leucine rich repeat	7.5E-05	12	27.00	74	108
LRR_8	Leucine rich repeat	3.9E-06	16	27.00	96	157
LRR_4	Leucine Rich repeats (2 copies)	6.8E-06	16	27.00	96	137
LRR_1	Leucine Rich Repeat	0.014	6	20.60	97	117
LRR_4	Leucine Rich repeats (2 copies)	0.018	5	27.00	137	153
LRR_4	Leucine Rich repeats (2 copies)	9E-05	12	27.00	145	182
LRR_1	Leucine Rich Repeat	0.0024	8	20.60	146	167
LRR_8	Leucine rich repeat	0.00074	9	27.00	165	204
DUF5612	Domain of unknown function (DUF5612)	0.38	0	25.00	190	237
LRR_4	Leucine Rich repeats (2 copies)	0.016	5	27.00	213	235
LRR_8	Leucine rich repeat	7.5E-06	15	27.00	214	253
DUF5612	Domain of unknown function (DUF5612)	0.1	2	25.00	217	263
LRR_4	Leucine Rich repeats (2 copies)	4.2E-05	13	27.00	219	256
LRR_1	Leucine Rich Repeat	0.01	6	20.60	221	242
LRR_1	Leucine Rich Repeat	0.43	1	20.60	244	267
LRR_4	Leucine Rich repeats (2 copies)	1.6E-05	15	27.00	244	278
DUF5612	Domain of unknown function (DUF5612)	0.06	2	25.00	256	287
LRR_8	Leucine rich repeat	3E-07	19	27.00	265	304
LRR_1	Leucine Rich Repeat	0.047	4	20.60	269	291
LRR_8	Leucine rich repeat	2.1E-06	17	27.00	292	352
LRR_4	Leucine Rich repeats (2 copies)	5.9E-07	19	27.00	292	331
LRR_1	Leucine Rich Repeat	0.0012	9	20.60	293	314
LRR_8	Leucine rich repeat	0.018	4	27.00	317	353
LRR_1	Leucine Rich Repeat	0.042	4	20.60	318	336
LRR_1	Leucine Rich Repeat	0.85	0	20.60	345	361
LRR_4	Leucine Rich repeats (2 copies)	0.88	-1	27.00	369	404
LRR_4	Leucine Rich repeats (2 copies)	0.17	2	27.00	390	425
LRR_8	Leucine rich repeat	3.2E-07	19	27.00	393	448
DUF5612	Domain of unknown function (DUF5612)	0.27	0	25.00	406	454
LRR_1	Leucine Rich Repeat	0.073	3	20.60	417	434
LRR_8	Leucine rich repeat	1.8E-07	20	27.00	437	472
LRR_4	Leucine Rich repeats (2 copies)	2E-06	17	27.00	437	474
LRR_1	Leucine Rich Repeat	0.0024	8	20.60	461	478
DUF5612	Domain of unknown function (DUF5612)	0.011	5	25.00	479	527
LRR_1	Leucine Rich Repeat	0.022	5	20.60	482	507
LRR_8	Leucine rich repeat	5.2E-07	19	27.00	484	542
LRR_4	Leucine Rich repeats (2 copies)	3.7E-05	13	27.00	485	524
LRR_1	Leucine Rich Repeat	0.0061	7	20.60	510	531
Pkinase	Protein kinase domain	0.049	2	20.40	590	659
Pkinase_fungal	Fungal protein kinase	0.001	7	24.10	657	722
Pkinase	Protein kinase domain	0	166	20.40	658	931
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	138	23.10	660	933
Pkinase_fungal	Fungal protein kinase	0.00022	9	24.10	782	855