c2pfam

AT1G27390.1 :

Domain Description Evalue Bits GA Start End
TOM20_plant Plant specific mitochondrial import receptor subunit TOM20 0 336 20.60 8 201
Pec_lyase_N Pectate lyase, N terminus 0.0073 6 20.70 15 31
YfdX YfdX protein 0.00013 11 22.60 43 114
DUF695 Family of unknown function (DUF695) 0.00012 12 22.40 57 126
TPR_11 TPR repeat 0.00013 11 26.80 58 86
TPR_19 Tetratricopeptide repeat 0.0025 8 25.00 59 110
TPR_1 Tetratricopeptide repeat 0.021 4 20.40 59 73
TPR_2 Tetratricopeptide repeat 0.0066 6 22.40 59 74
TPR_14 Tetratricopeptide repeat 0.45 1 23.50 60 74
TPR_20 Tetratricopeptide repeat 0.0073 6 25.00 60 89
Pec_lyase_N Pectate lyase, N terminus 0.00015 12 20.70 88 124
TPR_2 Tetratricopeptide repeat 0.00035 10 22.40 91 110
TPR_1 Tetratricopeptide repeat 0.0017 8 20.40 94 108
YfdX YfdX protein 0.0052 6 22.60 94 118
TPR_14 Tetratricopeptide repeat 0.0013 9 23.50 98 124
TPR_2 Tetratricopeptide repeat 0.00024 11 22.40 100 120
TPR_1 Tetratricopeptide repeat 0.0018 8 20.40 101 119
TPR_20 Tetratricopeptide repeat 0.047 4 25.00 107 131

210

TOM20_plant
Pec_lyase_N
YfdX
DUF695
TPR_11
TPR_19
TPR_1
TPR_2
TPR_14
TPR_20
Pec_lyase_N
TPR_2
TPR_1
YfdX
TPR_14
TPR_2
TPR_1
TPR_20

References:

TPR_20

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TOM20_plant
12691756 Peptide library approach with a disulfide tether to refine the Tom20 recognition motif in mitochondrial presequences. J Mol Biol 2003;328:495-504.

YfdX
12670992 Global analysis of genes regulated by EvgA of the two-component regulatory system in Escherichia coli. J Bacteriol. 2003;185:2667-2672.

TPR_14

DUF695

TPR_19

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_11

Pec_lyase_N

Domain	Description	Evalue	Bits	GA	Start	End
TOM20_plant	Plant specific mitochondrial import receptor subunit TOM20	0	336	20.60	8	201
Pec_lyase_N	Pectate lyase, N terminus	0.0073	6	20.70	15	31
YfdX	YfdX protein	0.00013	11	22.60	43	114
DUF695	Family of unknown function (DUF695)	0.00012	12	22.40	57	126
TPR_11	TPR repeat	0.00013	11	26.80	58	86
TPR_19	Tetratricopeptide repeat	0.0025	8	25.00	59	110
TPR_1	Tetratricopeptide repeat	0.021	4	20.40	59	73
TPR_2	Tetratricopeptide repeat	0.0066	6	22.40	59	74
TPR_14	Tetratricopeptide repeat	0.45	1	23.50	60	74
TPR_20	Tetratricopeptide repeat	0.0073	6	25.00	60	89
Pec_lyase_N	Pectate lyase, N terminus	0.00015	12	20.70	88	124
TPR_2	Tetratricopeptide repeat	0.00035	10	22.40	91	110
TPR_1	Tetratricopeptide repeat	0.0017	8	20.40	94	108
YfdX	YfdX protein	0.0052	6	22.60	94	118
TPR_14	Tetratricopeptide repeat	0.0013	9	23.50	98	124
TPR_2	Tetratricopeptide repeat	0.00024	11	22.40	100	120
TPR_1	Tetratricopeptide repeat	0.0018	8	20.40	101	119
TPR_20	Tetratricopeptide repeat	0.047	4	25.00	107	131