c2pfam

AT5G50960.1 :

Domain Description Evalue Bits GA Start End
NB-ARC NB-ARC domain 7.9E-05 12 23.50 55 80
RsgA_GTPase RsgA GTPase 2.5E-05 14 30.00 56 81
ParA ParA/MinD ATPase like 0 273 21.10 58 246
AAA_25 AAA domain 1.5E-05 14 27.00 59 86
MeaB Methylmalonyl Co-A mutase-associated GTPase MeaB 5.7E-05 12 23.10 59 99
MipZ ATPase MipZ 3.4E-07 19 20.70 60 108
ArsA_ATPase Anion-transporting ATPase 1.6E-09 27 21.60 60 135
AAA_31 AAA domain 1.7E-09 28 27.00 61 214
AAA_26 AAA domain 0.12 2 27.00 61 87
CBP_BcsQ Cellulose biosynthesis protein BcsQ 4.9E-05 13 21.30 61 122
CbiA CobQ/CobB/MinD/ParA nucleotide binding domain 4.8E-15 46 21.70 62 321
Fer4_NifH 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 1.6E-05 14 20.10 63 94
ArsA_ATPase Anion-transporting ATPase 1 -2 21.60 158 178
AAA_26 AAA domain 0.0013 8 27.00 196 240
ArsA_ATPase Anion-transporting ATPase 0.29 0 21.60 199 233
AAA_26 AAA domain 0.0082 6 27.00 258 313
Fer4_NifH 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 0.0055 6 20.10 273 342
ParA ParA/MinD ATPase like 4.1E-10 29 21.10 280 342

350

NB-ARC
RsgA_GTPase
ParA
AAA_25
MeaB
MipZ
ArsA_ATPase
AAA_31
AAA_26
CBP_BcsQ
CbiA
Fer4_NifH
ArsA_ATPase
AAA_26
ArsA_ATPase
AAA_26
Fer4_NifH
ParA

References:

NB-ARC
9545207 The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals. Curr Biol 1998;8:226-227.

RsgA_GTPase

Fer4_NifH

MipZ
16839883 MipZ, a spatial regulator coordinating chromosome segregation with cell division in Caulobacter. Cell. 2006;126:147-162.

ParA
2149583 A family of ATPases involved in active partitioning of diverse bacterial plasmids. Mol Microbiol 1990;4:1455-1463.
15728363 The eukaryotic P loop NTPase Nbp35: an essential component of the cytosolic and nuclear iron-sulfur protein assembly machinery. Proc Natl Acad Sci U S A. 2005;102:3266-3271.

CbiA
9742225 Cobalamin (vitamin B12) biosynthesis: identification and characterization of a Bacillus megaterium cobI operon. Biochem J 1998;335:159-166.
9742226 Cobalamin (vitamin B12) biosynthesis: functional characterization of the Bacillus megaterium cbi genes required to convert uroporphyrinogen III into cobyrinic acid a,c-diamide. Biochem J 1998;335:167-173.
7635831 Identification and sequence analysis of genes involved in late steps in cobalamin (vitamin B12) synthesis in Rhodobacter capsulatus. J Bacteriol 1995;177:4481-4487.
8501034 Characterization of the cobalamin (vitamin B12) biosynthetic genes of Salmonella typhimurium. J Bacteriol 1993;175:3303-3316.
10966576 The synthetase domains of cobalamin biosynthesis amidotransferases cobB and cobQ belong to a new family of ATP-dependent amidoligases, related to dethiobiotin synthetase. Proteins 2000;41:238-247.
2149583 A family of ATPases involved in active partitioning of diverse bacterial plasmids. Mol Microbiol 1990;4:1455-1463.

CBP_BcsQ

AAA_31

MeaB

AAA_26

AAA_25

ArsA_ATPase
1704144 The plasmid-encoded arsenical resistance pump: an anion-translocating ATPase. Res Microbiol 1990;141:336-341.

Domain	Description	Evalue	Bits	GA	Start	End
NB-ARC	NB-ARC domain	7.9E-05	12	23.50	55	80
RsgA_GTPase	RsgA GTPase	2.5E-05	14	30.00	56	81
ParA	ParA/MinD ATPase like	0	273	21.10	58	246
AAA_25	AAA domain	1.5E-05	14	27.00	59	86
MeaB	Methylmalonyl Co-A mutase-associated GTPase MeaB	5.7E-05	12	23.10	59	99
MipZ	ATPase MipZ	3.4E-07	19	20.70	60	108
ArsA_ATPase	Anion-transporting ATPase	1.6E-09	27	21.60	60	135
AAA_31	AAA domain	1.7E-09	28	27.00	61	214
AAA_26	AAA domain	0.12	2	27.00	61	87
CBP_BcsQ	Cellulose biosynthesis protein BcsQ	4.9E-05	13	21.30	61	122
CbiA	CobQ/CobB/MinD/ParA nucleotide binding domain	4.8E-15	46	21.70	62	321
Fer4_NifH	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	1.6E-05	14	20.10	63	94
ArsA_ATPase	Anion-transporting ATPase	1	-2	21.60	158	178
AAA_26	AAA domain	0.0013	8	27.00	196	240
ArsA_ATPase	Anion-transporting ATPase	0.29	0	21.60	199	233
AAA_26	AAA domain	0.0082	6	27.00	258	313
Fer4_NifH	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	0.0055	6	20.10	273	342
ParA	ParA/MinD ATPase like	4.1E-10	29	21.10	280	342