c2pfam

AT5G51300.1 :

Domain Description Evalue Bits GA Start End
SF1-HH Splicing factor 1 helix-hairpin domain 4.9E-32 100 29.30 126 237
KH_1 KH domain 1.1E-09 28 20.20 256 329
eIF3g Eukaryotic translation initiation factor 3 subunit G 0.027 4 22.00 344 379
PHD_4 PHD-finger 9.1E-06 15 30.60 360 405
zf-CCHC_4 Zinc knuckle 0.0047 6 27.00 361 377
zf-CCHC_3 Zinc knuckle 0.00071 9 27.00 361 378
zf-CCHC Zinc knuckle 5.2E-06 16 20.80 363 378
zf-CCHC_2 Zinc knuckle 0.00035 10 27.00 363 372
eIF3g Eukaryotic translation initiation factor 3 subunit G 5.1E-05 13 22.00 385 407
zf-CCHC_3 Zinc knuckle 0.0049 6 27.00 386 405
zf-CCHC_2 Zinc knuckle 0.017 5 27.00 388 397
zf-CCHC_4 Zinc knuckle 0.061 3 27.00 388 403
zf-CCHC Zinc knuckle 0.033 4 20.80 389 403
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.3E-20 63 20.70 482 551
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.1E-05 15 27.00 488 555

804

SF1-HH
KH_1
eIF3g
PHD_4
zf-CCHC_4
zf-CCHC_3
zf-CCHC
zf-CCHC_2
eIF3g
zf-CCHC_3
zf-CCHC_2
zf-CCHC_4
zf-CCHC
RRM_1
RRM_5

References:

RRM_5

zf-CCHC

zf-CCHC_3

zf-CCHC_4

KH_1
8036511 Conserved structures and diversity of functions of RNA-binding proteins. Science 1994;265:615-621.
8612276 Three-dimensional structure and stability of the KH domain: molecular insights into the fragile X syndrome. Cell 1996;85:237-245.

zf-CCHC_2

RRM_1
8290338 Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acid Res 1993;21:5803-5816.

eIF3g
17581632 Reconstitution reveals the functional core of mammalian eIF3. EMBO J. 2007;26:3373-3383.

SF1-HH

PHD_4

Domain	Description	Evalue	Bits	GA	Start	End
SF1-HH	Splicing factor 1 helix-hairpin domain	4.9E-32	100	29.30	126	237
KH_1	KH domain	1.1E-09	28	20.20	256	329
eIF3g	Eukaryotic translation initiation factor 3 subunit G	0.027	4	22.00	344	379
PHD_4	PHD-finger	9.1E-06	15	30.60	360	405
zf-CCHC_4	Zinc knuckle	0.0047	6	27.00	361	377
zf-CCHC_3	Zinc knuckle	0.00071	9	27.00	361	378
zf-CCHC	Zinc knuckle	5.2E-06	16	20.80	363	378
zf-CCHC_2	Zinc knuckle	0.00035	10	27.00	363	372
eIF3g	Eukaryotic translation initiation factor 3 subunit G	5.1E-05	13	22.00	385	407
zf-CCHC_3	Zinc knuckle	0.0049	6	27.00	386	405
zf-CCHC_2	Zinc knuckle	0.017	5	27.00	388	397
zf-CCHC_4	Zinc knuckle	0.061	3	27.00	388	403
zf-CCHC	Zinc knuckle	0.033	4	20.80	389	403
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.3E-20	63	20.70	482	551
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.1E-05	15	27.00	488	555