c2pfam

AT5G51340.1 :

Domain Description Evalue Bits GA Start End
TPR_2 Tetratricopeptide repeat 0.31 1 22.40 7 31
TPR_12 Tetratricopeptide repeat 0.37 1 30.10 7 32
TPR_14 Tetratricopeptide repeat 0.71 1 23.50 9 35
Cohesin_load Cohesin loading factor 3.8E-18 54 19.10 24 639
TPR_2 Tetratricopeptide repeat 0.058 3 22.40 52 76
TPR_12 Tetratricopeptide repeat 0.014 5 30.10 53 117
T3SSipB Type III cell invasion protein SipB 6.9E-05 13 31.00 234 300
NABP Nucleic acid binding protein NABP 8.1E-05 12 20.00 245 298
DUF2694 Protein of unknown function (DUF2694) 7.5E-05 12 20.90 442 495
TPR_2 Tetratricopeptide repeat 0.18 2 22.40 457 480
TPR_12 Tetratricopeptide repeat 9.5E-09 25 30.10 531 604
TPR_8 Tetratricopeptide repeat 0.025 5 25.70 531 560
TPR_2 Tetratricopeptide repeat 2.9E-05 14 22.40 532 563
TPR_14 Tetratricopeptide repeat 0.017 6 23.50 534 561
TPR_19 Tetratricopeptide repeat 0.00014 12 25.00 541 597
TPR_2 Tetratricopeptide repeat 0.054 3 22.40 572 603
TPR_8 Tetratricopeptide repeat 0.049 4 25.70 572 604
TPR_14 Tetratricopeptide repeat 0.29 2 23.50 575 603

726

TPR_2
TPR_12
TPR_14
Cohesin_load
TPR_2
TPR_12
T3SSipB
NABP
DUF2694
TPR_2
TPR_12
TPR_8
TPR_2
TPR_14
TPR_19
TPR_2
TPR_8
TPR_14

References:

NABP
15488989 A cDNA homologue of Schizosaccharomyces pombe cdc5(+) from the mushroom Lentinula edodes: characterization of the cDNA and its expressed product. Biochim Biophys Acta 2004;1680:93-102.

TPR_8

T3SSipB

TPR_19

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

Cohesin_load
16682348 A screen for cohesion mutants uncovers Ssl3, the fission yeast counterpart of the cohesin loading factor Scc4. Curr Biol. 2006;16:875-881.

TPR_14

TPR_12

DUF2694

Domain	Description	Evalue	Bits	GA	Start	End
TPR_2	Tetratricopeptide repeat	0.31	1	22.40	7	31
TPR_12	Tetratricopeptide repeat	0.37	1	30.10	7	32
TPR_14	Tetratricopeptide repeat	0.71	1	23.50	9	35
Cohesin_load	Cohesin loading factor	3.8E-18	54	19.10	24	639
TPR_2	Tetratricopeptide repeat	0.058	3	22.40	52	76
TPR_12	Tetratricopeptide repeat	0.014	5	30.10	53	117
T3SSipB	Type III cell invasion protein SipB	6.9E-05	13	31.00	234	300
NABP	Nucleic acid binding protein NABP	8.1E-05	12	20.00	245	298
DUF2694	Protein of unknown function (DUF2694)	7.5E-05	12	20.90	442	495
TPR_2	Tetratricopeptide repeat	0.18	2	22.40	457	480
TPR_12	Tetratricopeptide repeat	9.5E-09	25	30.10	531	604
TPR_8	Tetratricopeptide repeat	0.025	5	25.70	531	560
TPR_2	Tetratricopeptide repeat	2.9E-05	14	22.40	532	563
TPR_14	Tetratricopeptide repeat	0.017	6	23.50	534	561
TPR_19	Tetratricopeptide repeat	0.00014	12	25.00	541	597
TPR_2	Tetratricopeptide repeat	0.054	3	22.40	572	603
TPR_8	Tetratricopeptide repeat	0.049	4	25.70	572	604
TPR_14	Tetratricopeptide repeat	0.29	2	23.50	575	603