c2pfam

AT5G53170.1 :

Domain Description Evalue Bits GA Start End
AAA_16 AAA ATPase domain 0.8 1 32.60 195 217
DUF815 Protein of unknown function (DUF815) 0.0003 11 20.10 359 418
TsaE Threonylcarbamoyl adenosine biosynthesis protein TsaE 0.00038 11 26.60 389 421
RuvB_N Holliday junction DNA helicase ruvB N-terminus 5.1E-06 17 20.00 392 464
AAA_16 AAA ATPase domain 3.5E-05 15 32.60 393 417
Zeta_toxin Zeta toxin 0.00026 11 20.10 393 418
IstB_IS21 IstB-like ATP binding protein 8.5E-05 13 24.10 396 419
TIP49 TIP49 C-terminus 2.7E-06 17 23.80 396 431
ATPase KaiC 0.00042 10 26.60 397 413
AAA_18 AAA domain 1.7E-05 16 29.40 398 448
AAA_14 AAA domain 0.00017 12 27.00 398 476
AAA_28 AAA domain 2.6E-06 18 27.00 398 431
AAA_22 AAA domain 0.00025 12 27.00 398 417
AAA ATPase family associated with various cellular activities (AAA) 0 139 20.80 398 526
AAA_5 AAA domain (dynein-related subfamily) 2.3E-07 22 20.80 398 466
DUF2075 Uncharacterized conserved protein (DUF2075) 0.0002 11 20.30 398 419
Mg_chelatase Magnesium chelatase, subunit ChlI 0.00016 12 20.30 398 416
AAA_33 AAA domain 0.00047 11 27.00 398 436
AAA_17 AAA domain 0.00013 13 27.00 401 450
AAA_16 AAA ATPase domain 0.07 4 32.60 443 470
ATPase KaiC 0.3 1 26.60 446 493
AAA_22 AAA domain 0.15 3 27.00 448 484
AAA_lid_3 AAA+ lid domain 2.6E-11 34 27.20 549 590
Peptidase_M41 Peptidase family M41 0 206 20.60 608 783
ASL_C2 Argininosuccinate lyase C-terminal 0.055 5 27.30 700 715
DUF1319 Protein of unknown function (DUF1319) 0.0021 9 24.20 732 799
ASL_C2 Argininosuccinate lyase C-terminal 0.03 6 27.30 745 787

806

AAA_16
DUF815
TsaE
RuvB_N
AAA_16
Zeta_toxin
IstB_IS21
TIP49
ATPase
AAA_18
AAA_14
AAA_28
AAA_22
AAA
AAA_5
DUF2075
Mg_chelatase
AAA_33
AAA_17
AAA_16
ATPase
AAA_22
AAA_lid_3
Peptidase_M41
ASL_C2
DUF1319
ASL_C2

References:

IstB_IS21

AAA_16

AAA_14

TsaE

DUF2075

DUF815

Peptidase_M41

RuvB_N
12423347 The RuvABC resolvasome. Eur J Biochem 2002;269:5492-5501.

Zeta_toxin
12571357 Crystal structure of the plasmid maintenance system epsilon/zeta: functional mechanism of toxin zeta and inactivation by epsilon 2 zeta 2 complex formation. Proc Natl Acad Sci U S A 2003;100:1661-1666.

AAA_lid_3

DUF1319

Mg_chelatase
9359397 Mechanism and regulation of Mg-chelatase. Biochem J 1997;327:321-333.
9457877 Reconstitution of an active magnesium chelatase enzyme complex from the bchI, -D, and -H gene products of the green sulfur bacterium Chlorobium vibrioforme expressed in Escherichia coli. J Bacteriol 1998;180:699-704.

AAA_33

ATPase

AAA_5
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

AAA_28

AAA_17

AAA
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

ASL_C2

AAA_22

TIP49
12464178 Reptin and pontin antagonistically regulate heart growth in zebrafish embryos. Cell 2002;111:661-672.
10902922 Chromosome mapping and expression of human tip49 family genes. DNA Seq 2000;11:145-148.

AAA_18

Domain	Description	Evalue	Bits	GA	Start	End
AAA_16	AAA ATPase domain	0.8	1	32.60	195	217
DUF815	Protein of unknown function (DUF815)	0.0003	11	20.10	359	418
TsaE	Threonylcarbamoyl adenosine biosynthesis protein TsaE	0.00038	11	26.60	389	421
RuvB_N	Holliday junction DNA helicase ruvB N-terminus	5.1E-06	17	20.00	392	464
AAA_16	AAA ATPase domain	3.5E-05	15	32.60	393	417
Zeta_toxin	Zeta toxin	0.00026	11	20.10	393	418
IstB_IS21	IstB-like ATP binding protein	8.5E-05	13	24.10	396	419
TIP49	TIP49 C-terminus	2.7E-06	17	23.80	396	431
ATPase	KaiC	0.00042	10	26.60	397	413
AAA_18	AAA domain	1.7E-05	16	29.40	398	448
AAA_14	AAA domain	0.00017	12	27.00	398	476
AAA_28	AAA domain	2.6E-06	18	27.00	398	431
AAA_22	AAA domain	0.00025	12	27.00	398	417
AAA	ATPase family associated with various cellular activities (AAA)	0	139	20.80	398	526
AAA_5	AAA domain (dynein-related subfamily)	2.3E-07	22	20.80	398	466
DUF2075	Uncharacterized conserved protein (DUF2075)	0.0002	11	20.30	398	419
Mg_chelatase	Magnesium chelatase, subunit ChlI	0.00016	12	20.30	398	416
AAA_33	AAA domain	0.00047	11	27.00	398	436
AAA_17	AAA domain	0.00013	13	27.00	401	450
AAA_16	AAA ATPase domain	0.07	4	32.60	443	470
ATPase	KaiC	0.3	1	26.60	446	493
AAA_22	AAA domain	0.15	3	27.00	448	484
AAA_lid_3	AAA+ lid domain	2.6E-11	34	27.20	549	590
Peptidase_M41	Peptidase family M41	0	206	20.60	608	783
ASL_C2	Argininosuccinate lyase C-terminal	0.055	5	27.30	700	715
DUF1319	Protein of unknown function (DUF1319)	0.0021	9	24.20	732	799
ASL_C2	Argininosuccinate lyase C-terminal	0.03	6	27.30	745	787