c2pfam

AT5G53840.1 :

Domain Description Evalue Bits GA Start End
F-box F-box domain 1.4E-11 33 20.50 20 55
F-box-like F-box-like 9.7E-07 18 24.30 21 53
LRR_4 Leucine Rich repeats (2 copies) 0.00043 10 27.00 143 174
LRR_2 Leucine Rich Repeat 5.9E-09 25 20.90 163 188
PCuAC Copper chaperone PCu(A)C 7.9E-05 11 29.40 193 243
FBD FBD 0.83 -2 20.40 210 219
LRR_4 Leucine Rich repeats (2 copies) 0.37 0 27.00 235 252
F-box-like F-box-like 0.068 2 24.30 299 323
LRR_4 Leucine Rich repeats (2 copies) 0.017 5 27.00 323 345
LRR_2 Leucine Rich Repeat 0.2 1 20.90 324 338
LRR_2 Leucine Rich Repeat 0.48 0 20.90 339 353
FBD FBD 1.1E-17 52 20.40 364 406

444

F-box
F-box-like
LRR_4
LRR_2
PCuAC
FBD
LRR_4
F-box-like
LRR_4
LRR_2
LRR_2
FBD

References:

F-box-like

PCuAC

LRR_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

F-box
8706131 SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box. Cell 1996;86:263-274.
9346238 F-box proteins are receptors that recruit phosphorylated substrates to the SCF ubiquitin-ligase complex. Cell. 1997;91:209-219.

FBD
11779830 Systematic identification of novel protein domain families associated with nuclear functions. Genome Res 2002;12:47-56.

LRR_4

Domain	Description	Evalue	Bits	GA	Start	End
F-box	F-box domain	1.4E-11	33	20.50	20	55
F-box-like	F-box-like	9.7E-07	18	24.30	21	53
LRR_4	Leucine Rich repeats (2 copies)	0.00043	10	27.00	143	174
LRR_2	Leucine Rich Repeat	5.9E-09	25	20.90	163	188
PCuAC	Copper chaperone PCu(A)C	7.9E-05	11	29.40	193	243
FBD	FBD	0.83	-2	20.40	210	219
LRR_4	Leucine Rich repeats (2 copies)	0.37	0	27.00	235	252
F-box-like	F-box-like	0.068	2	24.30	299	323
LRR_4	Leucine Rich repeats (2 copies)	0.017	5	27.00	323	345
LRR_2	Leucine Rich Repeat	0.2	1	20.90	324	338
LRR_2	Leucine Rich Repeat	0.48	0	20.90	339	353
FBD	FBD	1.1E-17	52	20.40	364	406