c2pfam

AT5G56040.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 2E-14 43 20.70 29 68
LRR_4 Leucine Rich repeats (2 copies) 0.083 3 27.00 91 112
DUF5612 Domain of unknown function (DUF5612) 0.56 -1 25.00 91 115
LRR_8 Leucine rich repeat 2.5E-05 14 27.00 93 132
DUF5612 Domain of unknown function (DUF5612) 0.079 2 25.00 116 162
LRR_4 Leucine Rich repeats (2 copies) 1.6E-07 21 27.00 121 157
LRR_1 Leucine Rich Repeat 0.012 6 20.60 122 140
LRR_6 Leucine Rich repeat 0.036 4 23.40 122 135
LRR_8 Leucine rich repeat 6.8E-08 22 27.00 136 180
LRR_6 Leucine Rich repeat 0.76 0 23.40 144 158
LRR_1 Leucine Rich Repeat 0.02 5 20.60 145 167
LRR_1 Leucine Rich Repeat 0.29 2 20.60 169 190
LRR_4 Leucine Rich repeats (2 copies) 0.00066 10 27.00 169 202
LRR_4 Leucine Rich repeats (2 copies) 0.013 6 27.00 192 228
LRR_8 Leucine rich repeat 0.29 1 27.00 215 248
DUF5612 Domain of unknown function (DUF5612) 0.0076 6 25.00 235 282
LRR_8 Leucine rich repeat 2E-06 17 27.00 263 301
LRR_4 Leucine Rich repeats (2 copies) 0.011 6 27.00 263 279
LRR_4 Leucine Rich repeats (2 copies) 9.9E-06 16 27.00 265 306
LRR_1 Leucine Rich Repeat 0.59 1 20.60 267 282
LRR_4 Leucine Rich repeats (2 copies) 1.3E-05 15 27.00 289 329
LRR_1 Leucine Rich Repeat 0.4 2 20.60 290 309
LRR_8 Leucine rich repeat 1.6E-12 37 27.00 317 373
LRR_1 Leucine Rich Repeat 0.064 4 20.60 318 336
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.00026 11 27.70 333 440
LRR_6 Leucine Rich repeat 0.01 6 23.40 337 351
LRR_4 Leucine Rich repeats (2 copies) 7.6E-09 25 27.00 337 379
LRR_1 Leucine Rich Repeat 0.022 5 20.60 338 360
LRR_6 Leucine Rich repeat 0.0006 10 23.40 359 376
LRR_4 Leucine Rich repeats (2 copies) 2.4E-06 17 27.00 361 399
LRR_1 Leucine Rich Repeat 0.0022 8 20.60 362 384
LRR_4 Leucine Rich repeats (2 copies) 8.9E-05 13 27.00 385 424
LRR_8 Leucine rich repeat 1.3E-09 27 27.00 393 445
LRR_6 Leucine Rich repeat 0.017 5 23.40 408 423
LRR_1 Leucine Rich Repeat 0.0087 7 20.60 411 428
LRR_1 Leucine Rich Repeat 0.2 2 20.60 434 456
LRR_4 Leucine Rich repeats (2 copies) 0.00018 12 27.00 434 472
LRR_4 Leucine Rich repeats (2 copies) 6.8E-07 19 27.00 457 498
LRR_8 Leucine rich repeat 1E-08 24 27.00 457 517
LRR_1 Leucine Rich Repeat 0.13 3 20.60 458 480
LRR_4 Leucine Rich repeats (2 copies) 7.4E-06 16 27.00 481 517
LRR_1 Leucine Rich Repeat 0.045 4 20.60 482 504
LRR_6 Leucine Rich repeat 0.21 2 23.40 504 519
LRR_4 Leucine Rich repeats (2 copies) 9.6E-06 16 27.00 505 541
LRR_1 Leucine Rich Repeat 0.3 2 20.60 506 525
LRR_4 Leucine Rich repeats (2 copies) 6.4E-08 22 27.00 527 564
LRR_1 Leucine Rich Repeat 0.0071 7 20.60 528 549
LRR_6 Leucine Rich repeat 0.24 1 23.40 528 541
LRR_8 Leucine rich repeat 7.4E-09 25 27.00 528 586
LRR_4 Leucine Rich repeats (2 copies) 1.8E-05 15 27.00 551 591
LRR_6 Leucine Rich repeat 0.04 4 23.40 552 566
LRR_1 Leucine Rich Repeat 0.015 6 20.60 553 574
LRR_6 Leucine Rich repeat 0.0068 6 23.40 573 590
LRR_1 Leucine Rich Repeat 0.0081 7 20.60 576 595
LRR_4 Leucine Rich repeats (2 copies) 0.0074 6 27.00 576 610
LRR_4 Leucine Rich repeats (2 copies) 1.7E-06 18 27.00 604 641
LRR_1 Leucine Rich Repeat 0.032 5 20.60 604 623
LRR_6 Leucine Rich repeat 0.018 5 23.40 604 615
LRR_8 Leucine rich repeat 1.9E-08 24 27.00 604 658
LRR_6 Leucine Rich repeat 0.028 4 23.40 624 636
LRR_4 Leucine Rich repeats (2 copies) 8.5E-06 16 27.00 624 661
LRR_1 Leucine Rich Repeat 0.73 1 20.60 625 636
LRR_6 Leucine Rich repeat 0.0065 6 23.40 647 662
LRR_1 Leucine Rich Repeat 0.0063 7 20.60 648 667
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 1.7E-23 73 23.10 760 911
Pkinase_fungal Fungal protein kinase 0.0069 5 24.10 761 816
Pkinase Protein kinase domain 4.4E-28 88 20.40 761 939
Pkinase_fungal Fungal protein kinase 0.0045 5 24.10 870 909

953

LRRNT_2
LRR_4
DUF5612
LRR_8
DUF5612
LRR_4
LRR_1
LRR_6
LRR_8
LRR_6
LRR_1
LRR_1
LRR_4
LRR_4
LRR_8
DUF5612
LRR_8
LRR_4
LRR_4
LRR_1
LRR_4
LRR_1
LRR_8
LRR_1
LRR_5
LRR_6
LRR_4
LRR_1
LRR_6
LRR_4
LRR_1
LRR_4
LRR_8
LRR_6
LRR_1
LRR_1
LRR_4
LRR_4
LRR_8
LRR_1
LRR_4
LRR_1
LRR_6
LRR_4
LRR_1
LRR_4
LRR_1
LRR_6
LRR_8
LRR_4
LRR_6
LRR_1
LRR_6
LRR_1
LRR_4
LRR_4
LRR_1
LRR_6
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_1
PK_Tyr_Ser-Thr
Pkinase_fungal
Pkinase
Pkinase_fungal

References:

LRR_8

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_5

LRR_4

DUF5612

Pkinase_fungal

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	2E-14	43	20.70	29	68
LRR_4	Leucine Rich repeats (2 copies)	0.083	3	27.00	91	112
DUF5612	Domain of unknown function (DUF5612)	0.56	-1	25.00	91	115
LRR_8	Leucine rich repeat	2.5E-05	14	27.00	93	132
DUF5612	Domain of unknown function (DUF5612)	0.079	2	25.00	116	162
LRR_4	Leucine Rich repeats (2 copies)	1.6E-07	21	27.00	121	157
LRR_1	Leucine Rich Repeat	0.012	6	20.60	122	140
LRR_6	Leucine Rich repeat	0.036	4	23.40	122	135
LRR_8	Leucine rich repeat	6.8E-08	22	27.00	136	180
LRR_6	Leucine Rich repeat	0.76	0	23.40	144	158
LRR_1	Leucine Rich Repeat	0.02	5	20.60	145	167
LRR_1	Leucine Rich Repeat	0.29	2	20.60	169	190
LRR_4	Leucine Rich repeats (2 copies)	0.00066	10	27.00	169	202
LRR_4	Leucine Rich repeats (2 copies)	0.013	6	27.00	192	228
LRR_8	Leucine rich repeat	0.29	1	27.00	215	248
DUF5612	Domain of unknown function (DUF5612)	0.0076	6	25.00	235	282
LRR_8	Leucine rich repeat	2E-06	17	27.00	263	301
LRR_4	Leucine Rich repeats (2 copies)	0.011	6	27.00	263	279
LRR_4	Leucine Rich repeats (2 copies)	9.9E-06	16	27.00	265	306
LRR_1	Leucine Rich Repeat	0.59	1	20.60	267	282
LRR_4	Leucine Rich repeats (2 copies)	1.3E-05	15	27.00	289	329
LRR_1	Leucine Rich Repeat	0.4	2	20.60	290	309
LRR_8	Leucine rich repeat	1.6E-12	37	27.00	317	373
LRR_1	Leucine Rich Repeat	0.064	4	20.60	318	336
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.00026	11	27.70	333	440
LRR_6	Leucine Rich repeat	0.01	6	23.40	337	351
LRR_4	Leucine Rich repeats (2 copies)	7.6E-09	25	27.00	337	379
LRR_1	Leucine Rich Repeat	0.022	5	20.60	338	360
LRR_6	Leucine Rich repeat	0.0006	10	23.40	359	376
LRR_4	Leucine Rich repeats (2 copies)	2.4E-06	17	27.00	361	399
LRR_1	Leucine Rich Repeat	0.0022	8	20.60	362	384
LRR_4	Leucine Rich repeats (2 copies)	8.9E-05	13	27.00	385	424
LRR_8	Leucine rich repeat	1.3E-09	27	27.00	393	445
LRR_6	Leucine Rich repeat	0.017	5	23.40	408	423
LRR_1	Leucine Rich Repeat	0.0087	7	20.60	411	428
LRR_1	Leucine Rich Repeat	0.2	2	20.60	434	456
LRR_4	Leucine Rich repeats (2 copies)	0.00018	12	27.00	434	472
LRR_4	Leucine Rich repeats (2 copies)	6.8E-07	19	27.00	457	498
LRR_8	Leucine rich repeat	1E-08	24	27.00	457	517
LRR_1	Leucine Rich Repeat	0.13	3	20.60	458	480
LRR_4	Leucine Rich repeats (2 copies)	7.4E-06	16	27.00	481	517
LRR_1	Leucine Rich Repeat	0.045	4	20.60	482	504
LRR_6	Leucine Rich repeat	0.21	2	23.40	504	519
LRR_4	Leucine Rich repeats (2 copies)	9.6E-06	16	27.00	505	541
LRR_1	Leucine Rich Repeat	0.3	2	20.60	506	525
LRR_4	Leucine Rich repeats (2 copies)	6.4E-08	22	27.00	527	564
LRR_1	Leucine Rich Repeat	0.0071	7	20.60	528	549
LRR_6	Leucine Rich repeat	0.24	1	23.40	528	541
LRR_8	Leucine rich repeat	7.4E-09	25	27.00	528	586
LRR_4	Leucine Rich repeats (2 copies)	1.8E-05	15	27.00	551	591
LRR_6	Leucine Rich repeat	0.04	4	23.40	552	566
LRR_1	Leucine Rich Repeat	0.015	6	20.60	553	574
LRR_6	Leucine Rich repeat	0.0068	6	23.40	573	590
LRR_1	Leucine Rich Repeat	0.0081	7	20.60	576	595
LRR_4	Leucine Rich repeats (2 copies)	0.0074	6	27.00	576	610
LRR_4	Leucine Rich repeats (2 copies)	1.7E-06	18	27.00	604	641
LRR_1	Leucine Rich Repeat	0.032	5	20.60	604	623
LRR_6	Leucine Rich repeat	0.018	5	23.40	604	615
LRR_8	Leucine rich repeat	1.9E-08	24	27.00	604	658
LRR_6	Leucine Rich repeat	0.028	4	23.40	624	636
LRR_4	Leucine Rich repeats (2 copies)	8.5E-06	16	27.00	624	661
LRR_1	Leucine Rich Repeat	0.73	1	20.60	625	636
LRR_6	Leucine Rich repeat	0.0065	6	23.40	647	662
LRR_1	Leucine Rich Repeat	0.0063	7	20.60	648	667
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	1.7E-23	73	23.10	760	911
Pkinase_fungal	Fungal protein kinase	0.0069	5	24.10	761	816
Pkinase	Protein kinase domain	4.4E-28	88	20.40	761	939
Pkinase_fungal	Fungal protein kinase	0.0045	5	24.10	870	909