c2pfam

AT5G56290.1 :

Domain Description Evalue Bits GA Start End
TPR_16 Tetratricopeptide repeat 4E-07 21 32.70 462 523
TPR_2 Tetratricopeptide repeat 0.4 1 22.40 463 490
TPR_11 TPR repeat 0.0029 7 26.80 464 504
TPR_14 Tetratricopeptide repeat 0.0074 7 23.50 465 498
TPR_19 Tetratricopeptide repeat 0.00014 13 25.00 471 524
TPR_12 Tetratricopeptide repeat 0.065 4 30.10 475 520
TPR_9 Tetratricopeptide repeat 0.00055 10 35.00 476 524
TPR_17 Tetratricopeptide repeat 0.00025 12 24.40 486 511
TPR_2 Tetratricopeptide repeat 9.2E-06 16 22.40 491 524
TPR_1 Tetratricopeptide repeat 0.0045 7 20.40 491 524
TPR_14 Tetratricopeptide repeat 0.00026 12 23.50 492 532
TPR_8 Tetratricopeptide repeat 0.00043 11 25.70 493 524
TPR_7 Tetratricopeptide repeat 0.39 1 27.90 496 512
TPR_6 Tetratricopeptide repeat 0.2 3 26.30 497 522
TPR_20 Tetratricopeptide repeat 0.00054 10 25.00 507 558
TPR_11 TPR repeat 0.09 3 26.80 509 535
TPR_17 Tetratricopeptide repeat 0.029 5 24.40 515 535
PPTA Protein prenyltransferase alpha subunit repeat 0.73 0 20.20 544 558
TPR_14 Tetratricopeptide repeat 0.012 7 23.50 572 598
TPR_19 Tetratricopeptide repeat 2.1E-07 21 25.00 572 630
TPR_16 Tetratricopeptide repeat 6.7E-05 14 32.70 576 623
TPR_2 Tetratricopeptide repeat 0.64 1 22.40 577 589
TPR_17 Tetratricopeptide repeat 0.00055 11 24.40 578 610
TPR_11 TPR repeat 0.00021 11 26.80 579 600
TPR_20 Tetratricopeptide repeat 0.06 4 25.00 580 618
TPR_12 Tetratricopeptide repeat 0.0024 8 30.10 586 620
TPR_8 Tetratricopeptide repeat 6.1E-05 13 25.70 590 623
TPR_2 Tetratricopeptide repeat 9.1E-06 16 22.40 590 623
TPR_1 Tetratricopeptide repeat 3.6E-08 23 20.40 590 623
TPR_7 Tetratricopeptide repeat 0.00089 10 27.90 596 623
TPR_12 Tetratricopeptide repeat 0.00048 11 30.10 596 654
TPR_6 Tetratricopeptide repeat 0.2 3 26.30 596 620
TPR_10 Tetratricopeptide repeat 0.42 1 27.50 596 619
TPR_14 Tetratricopeptide repeat 3.9E-05 15 23.50 597 631
TPR_9 Tetratricopeptide repeat 0.0041 7 35.00 603 633
TPR_9 Tetratricopeptide repeat 0.0014 9 35.00 603 648
TPR_11 TPR repeat 1E-07 22 26.80 605 635
PPTA Protein prenyltransferase alpha subunit repeat 0.00066 10 20.20 607 628
TPR_17 Tetratricopeptide repeat 0.00015 12 24.40 613 644
TPR_8 Tetratricopeptide repeat 0.00072 10 25.70 625 657
TPR_1 Tetratricopeptide repeat 6.1E-06 16 20.40 626 657
TPR_2 Tetratricopeptide repeat 0.00025 11 22.40 626 657
TPR_7 Tetratricopeptide repeat 0.051 4 27.90 629 654
TPR_9 Tetratricopeptide repeat 6.4E-06 16 35.00 636 694
TPR_12 Tetratricopeptide repeat 5.7E-06 17 30.10 639 688
TPR_6 Tetratricopeptide repeat 0.33 2 26.30 639 653
TPR_19 Tetratricopeptide repeat 7.4E-07 20 25.00 639 698
TPR_16 Tetratricopeptide repeat 3.1E-08 24 32.70 640 691
TPR_20 Tetratricopeptide repeat 0.55 1 25.00 640 688
TPR_14 Tetratricopeptide repeat 0.0038 8 23.50 641 665
TPR_11 TPR repeat 5E-10 29 26.80 642 672
TPR_17 Tetratricopeptide repeat 5.2E-07 20 24.40 646 676
TPR_14 Tetratricopeptide repeat 1.5E-06 19 23.50 659 698
TPR_8 Tetratricopeptide repeat 3.6E-07 20 25.70 659 690
TPR_2 Tetratricopeptide repeat 4.6E-09 26 22.40 659 690
TPR_1 Tetratricopeptide repeat 5.4E-11 32 20.40 659 690
TPR_7 Tetratricopeptide repeat 1.8E-06 18 27.90 660 688
TPR_6 Tetratricopeptide repeat 0.058 4 26.30 660 688
TPR_10 Tetratricopeptide repeat 0.0049 7 27.50 663 687
TPR_11 TPR repeat 0.007 6 26.80 668 695
PPTA Protein prenyltransferase alpha subunit repeat 0.16 2 20.20 680 700
TPR_17 Tetratricopeptide repeat 0.23 2 24.40 681 698

728

TPR_16
TPR_2
TPR_11
TPR_14
TPR_19
TPR_12
TPR_9
TPR_17
TPR_2
TPR_1
TPR_14
TPR_8
TPR_7
TPR_6
TPR_20
TPR_11
TPR_17
PPTA
TPR_14
TPR_19
TPR_16
TPR_2
TPR_17
TPR_11
TPR_20
TPR_12
TPR_8
TPR_2
TPR_1
TPR_7
TPR_12
TPR_6
TPR_10
TPR_14
TPR_9
TPR_9
TPR_11
PPTA
TPR_17
TPR_8
TPR_1
TPR_2
TPR_7
TPR_9
TPR_12
TPR_6
TPR_19
TPR_16
TPR_20
TPR_14
TPR_11
TPR_17
TPR_14
TPR_8
TPR_2
TPR_1
TPR_7
TPR_6
TPR_10
TPR_11
PPTA
TPR_17

References:

TPR_7

TPR_6

TPR_20

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_19

TPR_17

TPR_16

TPR_14

TPR_12

TPR_11

TPR_10

PPTA
9843427 Crystal structure of farnesyl protein transferase complexed with a CaaX peptide and farnesyl diphosphate analogue. Biochemistry 1998;37:16601-16611.
12702202 Protein prenyltransferases. Genome Biol 2003;4:212.

TPR_9

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
TPR_16	Tetratricopeptide repeat	4E-07	21	32.70	462	523
TPR_2	Tetratricopeptide repeat	0.4	1	22.40	463	490
TPR_11	TPR repeat	0.0029	7	26.80	464	504
TPR_14	Tetratricopeptide repeat	0.0074	7	23.50	465	498
TPR_19	Tetratricopeptide repeat	0.00014	13	25.00	471	524
TPR_12	Tetratricopeptide repeat	0.065	4	30.10	475	520
TPR_9	Tetratricopeptide repeat	0.00055	10	35.00	476	524
TPR_17	Tetratricopeptide repeat	0.00025	12	24.40	486	511
TPR_2	Tetratricopeptide repeat	9.2E-06	16	22.40	491	524
TPR_1	Tetratricopeptide repeat	0.0045	7	20.40	491	524
TPR_14	Tetratricopeptide repeat	0.00026	12	23.50	492	532
TPR_8	Tetratricopeptide repeat	0.00043	11	25.70	493	524
TPR_7	Tetratricopeptide repeat	0.39	1	27.90	496	512
TPR_6	Tetratricopeptide repeat	0.2	3	26.30	497	522
TPR_20	Tetratricopeptide repeat	0.00054	10	25.00	507	558
TPR_11	TPR repeat	0.09	3	26.80	509	535
TPR_17	Tetratricopeptide repeat	0.029	5	24.40	515	535
PPTA	Protein prenyltransferase alpha subunit repeat	0.73	0	20.20	544	558
TPR_14	Tetratricopeptide repeat	0.012	7	23.50	572	598
TPR_19	Tetratricopeptide repeat	2.1E-07	21	25.00	572	630
TPR_16	Tetratricopeptide repeat	6.7E-05	14	32.70	576	623
TPR_2	Tetratricopeptide repeat	0.64	1	22.40	577	589
TPR_17	Tetratricopeptide repeat	0.00055	11	24.40	578	610
TPR_11	TPR repeat	0.00021	11	26.80	579	600
TPR_20	Tetratricopeptide repeat	0.06	4	25.00	580	618
TPR_12	Tetratricopeptide repeat	0.0024	8	30.10	586	620
TPR_8	Tetratricopeptide repeat	6.1E-05	13	25.70	590	623
TPR_2	Tetratricopeptide repeat	9.1E-06	16	22.40	590	623
TPR_1	Tetratricopeptide repeat	3.6E-08	23	20.40	590	623
TPR_7	Tetratricopeptide repeat	0.00089	10	27.90	596	623
TPR_12	Tetratricopeptide repeat	0.00048	11	30.10	596	654
TPR_6	Tetratricopeptide repeat	0.2	3	26.30	596	620
TPR_10	Tetratricopeptide repeat	0.42	1	27.50	596	619
TPR_14	Tetratricopeptide repeat	3.9E-05	15	23.50	597	631
TPR_9	Tetratricopeptide repeat	0.0041	7	35.00	603	633
TPR_9	Tetratricopeptide repeat	0.0014	9	35.00	603	648
TPR_11	TPR repeat	1E-07	22	26.80	605	635
PPTA	Protein prenyltransferase alpha subunit repeat	0.00066	10	20.20	607	628
TPR_17	Tetratricopeptide repeat	0.00015	12	24.40	613	644
TPR_8	Tetratricopeptide repeat	0.00072	10	25.70	625	657
TPR_1	Tetratricopeptide repeat	6.1E-06	16	20.40	626	657
TPR_2	Tetratricopeptide repeat	0.00025	11	22.40	626	657
TPR_7	Tetratricopeptide repeat	0.051	4	27.90	629	654
TPR_9	Tetratricopeptide repeat	6.4E-06	16	35.00	636	694
TPR_12	Tetratricopeptide repeat	5.7E-06	17	30.10	639	688
TPR_6	Tetratricopeptide repeat	0.33	2	26.30	639	653
TPR_19	Tetratricopeptide repeat	7.4E-07	20	25.00	639	698
TPR_16	Tetratricopeptide repeat	3.1E-08	24	32.70	640	691
TPR_20	Tetratricopeptide repeat	0.55	1	25.00	640	688
TPR_14	Tetratricopeptide repeat	0.0038	8	23.50	641	665
TPR_11	TPR repeat	5E-10	29	26.80	642	672
TPR_17	Tetratricopeptide repeat	5.2E-07	20	24.40	646	676
TPR_14	Tetratricopeptide repeat	1.5E-06	19	23.50	659	698
TPR_8	Tetratricopeptide repeat	3.6E-07	20	25.70	659	690
TPR_2	Tetratricopeptide repeat	4.6E-09	26	22.40	659	690
TPR_1	Tetratricopeptide repeat	5.4E-11	32	20.40	659	690
TPR_7	Tetratricopeptide repeat	1.8E-06	18	27.90	660	688
TPR_6	Tetratricopeptide repeat	0.058	4	26.30	660	688
TPR_10	Tetratricopeptide repeat	0.0049	7	27.50	663	687
TPR_11	TPR repeat	0.007	6	26.80	668	695
PPTA	Protein prenyltransferase alpha subunit repeat	0.16	2	20.20	680	700
TPR_17	Tetratricopeptide repeat	0.23	2	24.40	681	698