c2pfam

AT1G28050.1 :

Domain Description Evalue Bits GA Start End
zf-RING_9 Putative zinc-RING and/or ribbon 0.031 3 28.10 6 55
zf-B_box B-box zinc finger 1.5E-07 20 22.00 7 47
CEBP_ZZ Cytoplasmic polyadenylation element-binding protein ZZ domain 5E-05 12 29.10 8 46
PHD PHD-finger 0.8 -2 27.90 9 55
CEBP_ZZ Cytoplasmic polyadenylation element-binding protein ZZ domain 0.45 -1 29.10 47 89
zf-RING_9 Putative zinc-RING and/or ribbon 0.0031 6 28.10 48 88
zf-B_box B-box zinc finger 2.2E-08 23 22.00 49 80
PHD PHD-finger 0.0004 9 27.90 51 85
CCT CCT motif 6.4E-20 60 20.60 385 427

433

zf-RING_9
zf-B_box
CEBP_ZZ
PHD
CEBP_ZZ
zf-RING_9
zf-B_box
PHD
CCT

References:

CEBP_ZZ

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

zf-RING_9

CCT
10926537 Cloning of the Arabidopsis clock gene TOC1, an autoregulatory response regulator homolog. Science 2000;289:768-771.

zf-B_box

Domain	Description	Evalue	Bits	GA	Start	End
zf-RING_9	Putative zinc-RING and/or ribbon	0.031	3	28.10	6	55
zf-B_box	B-box zinc finger	1.5E-07	20	22.00	7	47
CEBP_ZZ	Cytoplasmic polyadenylation element-binding protein ZZ domain	5E-05	12	29.10	8	46
PHD	PHD-finger	0.8	-2	27.90	9	55
CEBP_ZZ	Cytoplasmic polyadenylation element-binding protein ZZ domain	0.45	-1	29.10	47	89
zf-RING_9	Putative zinc-RING and/or ribbon	0.0031	6	28.10	48	88
zf-B_box	B-box zinc finger	2.2E-08	23	22.00	49	80
PHD	PHD-finger	0.0004	9	27.90	51	85
CCT	CCT motif	6.4E-20	60	20.60	385	427