c2pfam

AT5G57360.1 :

Domain Description Evalue Bits GA Start End
PAS PAS fold 4.3E-10 30 22.60 39 153
PAS_8 PAS domain 5.7E-06 16 21.80 39 82
PAS_9 PAS domain 5.9E-18 55 27.00 44 154
PAS_3 PAS fold 2.4E-09 27 20.70 59 153
F-box F-box domain 3.6E-10 29 20.50 197 242
F-box-like F-box-like 2.6E-11 33 24.30 205 243
F-box_5 F-box 7.8E-05 12 25.50 208 230
Kelch_3 Galactose oxidase, central domain 0.039 4 21.90 275 300
Kelch_5 Kelch motif 6.7E-05 13 27.00 292 328
Kelch_1 Kelch motif 2.1E-07 20 20.10 292 329
Kelch_6 Kelch motif 7.4E-07 19 25.30 293 341
Kelch_2 Kelch motif 0.0037 7 21.30 293 311
Kelch_4 Galactose oxidase, central domain 9E-14 41 21.60 293 343
Kelch_3 Galactose oxidase, central domain 4.4E-10 30 21.90 302 351
Kelch_5 Kelch motif 6.5E-07 19 27.00 342 379
Kelch_4 Galactose oxidase, central domain 1.5E-13 40 21.60 344 396
Kelch_2 Kelch motif 7.1E-05 13 21.30 345 388
Kelch_6 Kelch motif 5.2E-05 13 25.30 345 390
Kelch_1 Kelch motif 0.00015 11 20.10 352 387
Kelch_3 Galactose oxidase, central domain 1.5E-12 38 21.90 357 404
Kelch_5 Kelch motif 1.8E-05 14 27.00 394 431
Kelch_4 Galactose oxidase, central domain 9.9E-08 22 21.60 396 442
Kelch_2 Kelch motif 1.3E-05 15 21.30 397 442
Kelch_6 Kelch motif 0.0035 8 25.30 400 447
Kelch_1 Kelch motif 0.00015 11 20.10 401 442
Kelch_3 Galactose oxidase, central domain 1E-07 22 21.90 410 458
Kelch_5 Kelch motif 4.8E-05 13 27.00 446 485
Kelch_2 Kelch motif 1.7E-08 24 21.30 450 501
Kelch_4 Galactose oxidase, central domain 0.005 7 21.60 450 473
Kelch_6 Kelch motif 0.0036 8 25.30 450 476
Kelch_1 Kelch motif 0.04 4 20.10 456 497
Kelch_3 Galactose oxidase, central domain 0.12 3 21.90 460 498
Kelch_5 Kelch motif 7.1E-05 13 27.00 513 549
Kelch_4 Galactose oxidase, central domain 8.3E-07 19 21.60 515 560
Kelch_2 Kelch motif 7.9E-07 19 21.30 516 563
Kelch_6 Kelch motif 0.00017 12 25.30 516 551
Kelch_1 Kelch motif 0.0035 7 20.10 521 560
Kelch_3 Galactose oxidase, central domain 2E-05 15 21.90 526 574
Kelch_4 Galactose oxidase, central domain 0.0033 7 21.60 571 605
Kelch_6 Kelch motif 0.017 5 25.30 571 591
Kelch_1 Kelch motif 0.096 2 20.10 573 591
Kelch_3 Galactose oxidase, central domain 0.97 0 21.90 577 606

609

PAS
PAS_8
PAS_9
PAS_3
F-box
F-box-like
F-box_5
Kelch_3
Kelch_5
Kelch_1
Kelch_6
Kelch_2
Kelch_4
Kelch_3
Kelch_5
Kelch_4
Kelch_2
Kelch_6
Kelch_1
Kelch_3
Kelch_5
Kelch_4
Kelch_2
Kelch_6
Kelch_1
Kelch_3
Kelch_5
Kelch_2
Kelch_4
Kelch_6
Kelch_1
Kelch_3
Kelch_5
Kelch_4
Kelch_2
Kelch_6
Kelch_1
Kelch_3
Kelch_4
Kelch_6
Kelch_1
Kelch_3

References:

Kelch_3

PAS_8

Kelch_1
8126718 Drosophila kelch motif is derived from a common enzyme fold. J Mol Biol 1994;236:1277-1282.
2002850 Novel thioether bond revealed by a 1.7 A crystal structure of galactose oxidase. Nature 1991;350:87-90.
15475350 Crystal structure of the Kelch domain of human Keap1. J Biol Chem 2004;279:54750-54758.

Kelch_4

F-box
8706131 SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box. Cell 1996;86:263-274.
9346238 F-box proteins are receptors that recruit phosphorylated substrates to the SCF ubiquitin-ligase complex. Cell. 1997;91:209-219.

PAS_3
9301332 PAS domain S-boxes in archaea, bacteria and sensors for oxygen and redox. Trends Biochem Sci 1997;22:331-333.
7756254 1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore. Biochemistry 1995;34:6278-6287.
9382818 PAS: a multifunctional domain family comes to light. Curr Biol 1997;7:674-677.
15009198 The PAS fold: a redefination of the PAS domain based upon structural prediction. Eur J Biochem 2004;271:1198-1208.

PAS
9301332 PAS domain S-boxes in archaea, bacteria and sensors for oxygen and redox. Trends Biochem Sci 1997;22:331-333.
7756254 1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore. Biochemistry 1995;34:6278-6287.
9382818 PAS: a multifunctional domain family comes to light. Curr Biol 1997;7:674-677.
15009198 The PAS fold: a redefination of the PAS domain based upon structural prediction. Eur J Biochem 2004;271:1198-1208.

F-box_5

PAS_9

F-box-like

Kelch_6

Kelch_5

Kelch_2
8126718 Drosophila kelch motif is derived from a common enzyme fold. J Mol Biol 1994;236:1277-1282.
2002850 Novel thioether bond revealed by a 1.7 A crystal structure of galactose oxidase. Nature 1991;350:87-90.
15475350 Crystal structure of the Kelch domain of human Keap1. J Biol Chem 2004;279:54750-54758.

Domain	Description	Evalue	Bits	GA	Start	End
PAS	PAS fold	4.3E-10	30	22.60	39	153
PAS_8	PAS domain	5.7E-06	16	21.80	39	82
PAS_9	PAS domain	5.9E-18	55	27.00	44	154
PAS_3	PAS fold	2.4E-09	27	20.70	59	153
F-box	F-box domain	3.6E-10	29	20.50	197	242
F-box-like	F-box-like	2.6E-11	33	24.30	205	243
F-box_5	F-box	7.8E-05	12	25.50	208	230
Kelch_3	Galactose oxidase, central domain	0.039	4	21.90	275	300
Kelch_5	Kelch motif	6.7E-05	13	27.00	292	328
Kelch_1	Kelch motif	2.1E-07	20	20.10	292	329
Kelch_6	Kelch motif	7.4E-07	19	25.30	293	341
Kelch_2	Kelch motif	0.0037	7	21.30	293	311
Kelch_4	Galactose oxidase, central domain	9E-14	41	21.60	293	343
Kelch_3	Galactose oxidase, central domain	4.4E-10	30	21.90	302	351
Kelch_5	Kelch motif	6.5E-07	19	27.00	342	379
Kelch_4	Galactose oxidase, central domain	1.5E-13	40	21.60	344	396
Kelch_2	Kelch motif	7.1E-05	13	21.30	345	388
Kelch_6	Kelch motif	5.2E-05	13	25.30	345	390
Kelch_1	Kelch motif	0.00015	11	20.10	352	387
Kelch_3	Galactose oxidase, central domain	1.5E-12	38	21.90	357	404
Kelch_5	Kelch motif	1.8E-05	14	27.00	394	431
Kelch_4	Galactose oxidase, central domain	9.9E-08	22	21.60	396	442
Kelch_2	Kelch motif	1.3E-05	15	21.30	397	442
Kelch_6	Kelch motif	0.0035	8	25.30	400	447
Kelch_1	Kelch motif	0.00015	11	20.10	401	442
Kelch_3	Galactose oxidase, central domain	1E-07	22	21.90	410	458
Kelch_5	Kelch motif	4.8E-05	13	27.00	446	485
Kelch_2	Kelch motif	1.7E-08	24	21.30	450	501
Kelch_4	Galactose oxidase, central domain	0.005	7	21.60	450	473
Kelch_6	Kelch motif	0.0036	8	25.30	450	476
Kelch_1	Kelch motif	0.04	4	20.10	456	497
Kelch_3	Galactose oxidase, central domain	0.12	3	21.90	460	498
Kelch_5	Kelch motif	7.1E-05	13	27.00	513	549
Kelch_4	Galactose oxidase, central domain	8.3E-07	19	21.60	515	560
Kelch_2	Kelch motif	7.9E-07	19	21.30	516	563
Kelch_6	Kelch motif	0.00017	12	25.30	516	551
Kelch_1	Kelch motif	0.0035	7	20.10	521	560
Kelch_3	Galactose oxidase, central domain	2E-05	15	21.90	526	574
Kelch_4	Galactose oxidase, central domain	0.0033	7	21.60	571	605
Kelch_6	Kelch motif	0.017	5	25.30	571	591
Kelch_1	Kelch motif	0.096	2	20.10	573	591
Kelch_3	Galactose oxidase, central domain	0.97	0	21.90	577	606