AT5G57960.1 :

DomainDescriptionEvalueBitsGAStartEnd
GTP-bdg_NGTP-binding GTPase N-terminal2.9E-3611525.40135224
ZnuAZinc-uptake complex component A periplasmic0.000441029.00142215
MMR_HSR1GTPase of unknown function0.53124.50143181
GTP-bdg_MGTP-binding GTPase Middle Region1.4E-299329.50227304
BCAS2Breast carcinoma amplified sequence 2 (BCAS2)0.00041121.20228299
ABC_tranABC transporter0.97023.10250295
Nup54_57_CNUP57/Nup54 C-terminal domain0.000211125.60281295
ABC_ATPasePredicted ATPase of the ABC class0.000161119.30306374
RsgA_GTPaseRsgA GTPase9.9E-071930.00309368
cobWCobW/HypB/UreG, nucleotide-binding domain0.0033720.70310330
SRPRBSignal recognition particle receptor beta subunit0.000151220.50310397
ABC_tranABC transporter0.000111323.10311340
MMR_HSR1GTPase of unknown function4.3E-247524.50312430
FeoB_NFerrous iron transport protein B2.5E-092721.20312437
Dynamin_NDynamin family3E-072121.00312348
RocRas of Complex, Roc, domain of DAPkinase0.000391127.00312397
RasRas family0.000241120.80314443
ArfADP-ribosylation factor family2.3E-072120.30314478
Gtr1_RagAGtr1/RagA G protein conserved region9.8E-061620.10314443
cobWCobW/HypB/UreG, nucleotide-binding domain4.6E-051320.70354445
Dynamin_NDynamin family0.021521.00361430
Methyltransf_28Putative S-adenosyl-L-methionine-dependent methyltransferase6.8E-051323.30375438
GTP_EFTUElongation factor Tu GTP binding domain0.000141220.20390471
RsgA_GTPaseRsgA GTPase0.000341130.00404471
MMR_HSR1_XtnC-terminal region of MMR_HSR1 domain6.9E-082335.20407473
MMR_HSR1_XtnC-terminal region of MMR_HSR1 domain0.68135.20472520

 540

GTP-bdg_N
ZnuA
MMR_HSR1
GTP-bdg_M
BCAS2
ABC_tran
Nup54_57_C
ABC_ATPase
RsgA_GTPase
cobW
SRPRB
ABC_tran
MMR_HSR1
FeoB_N
Dynamin_N
Roc
Ras
Arf
Gtr1_RagA
cobW
Dynamin_N
Methyltransf_28
GTP_EFTU
RsgA_GTPase
MMR_HSR1_Xtn
MMR_HSR1_Xtn


References:

Arf
7990966 Structure of the human ADP-ribosylation factor 1 complexed with GDP. Nature 1994;372:704-708.
7759471 Structure and function of ARF proteins: Activators of cholera toxin and critical components of intracellular vesicular transport processes. J. Biol. Chem. 1995;270:12327-12330.
7770914 Arf proteins: the membrane traffic police? Trends Biochem Sci 1995;20:147-150.
1899243 Human ADP-ribosylation factors. A functionally conserved family of GTP-binding proteins. J Biol Chem 1991;266:2606-2614.

Methyltransf_28

ABC_tran
1864505 Homology between proteins controlling Streptomyces fradiae tylosin resistance and ATP-binding transport. Gene 1991;102:27-32.
1977073 Structure and function of haemolysin B,P-glycoprotein and other members of a novel family of membrane translocators. Mol Microbiol 1990;4:873-880.
2229036 Binding protein-dependent transport systems. J Bioenerg Biomembr 1990;22:571-592.
9872322 Crystal structure of the ATP-binding subunit of an ABC transporter. Nature 1998;396:703-707.

MMR_HSR1_Xtn

SRPRB
7844142 The beta subunit of the signal recognition particle receptor is a transmembrane GTPase that anchors the alpha subunit, a peripheral membrane GTPase, to the endoplasmic reticulum membrane. J Cell Biol. 1995;128:273-282.

RsgA_GTPase

ABC_ATPase

GTP-bdg_N

GTP-bdg_M

Ras
11387043 The Rab GTPase family. Genome Biol 2001;2:REVIEWS3007.

Dynamin_N
8939066 Dynamin GTPase, a force-generating molecular switch. Bioessays 1996;18:885-893.
2144893 Molecular cloning of the microtubule-associated mechanochemical enzyme dynamin reveals homology with a new family of GTP-binding proteins. Nature 1990;347:256-261.

Nup54_57_C

MMR_HSR1
8180467 Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. Mamm Genome 1994;5:100-105.

FeoB_N
8407793 Characterization of the ferrous iron uptake system of Escherichia coli. J Bacteriol 1993;175:6212-6219.

ZnuA

Roc

cobW
9140970 The HypB protein from Bradyrhizobium japonicum can store nickel and is required for the nickel-dependent transcriptional regulation of hydrogenase. Mol Microbiol 1997;24:119-128.
9209019 Characterization of UreG, identification of a UreD-UreF-UreG complex, and evidence suggesting that a nucleotide-binding site in UreG is required for in vivo metallocenter assembly of Klebsiella aerogenes urease. J Bacteriol 1997;179:4081-4086.
8423137 The product of the hypB gene, which is required for nickel incorporation into hydrogenases, is a novel guanine nucleotide-binding protein. J Bacteriol 1993;175:630-635.
1624427 Klebsiella aerogenes urease gene cluster: sequence of ureD and demonstration that four accessory genes (ureD, ureE, ureF, and ureG) are involved in nickel metallocenter biosynthesis. J Bacteriol 1992;174:4324-4330.
1655697 Nucleotide sequence and genetic analysis of a 13.1-kilobase-pair Pseudomonas denitrificans DNA fragment containing five cob genes and identification of structural genes encoding Cob(I)alamin adenosyltransferase, cobyric acid synthase, and bifunctional cob J Bacteriol 1991;173:6074-6087.

Gtr1_RagA
1620108 Putative GTP-binding protein, Gtr1, associated with the function of the Pho84 inorganic phosphate transporter in Saccharomyces cerevisiae. Mol Cell Biol 1992;12:2958-2966.
7499430 Cloning of a novel family of mammalian GTP-binding proteins (RagA, RagBs, RagB1) with remote similarity to the Ras-related GTPases. J Biol Chem 1995;270:28982-28988.
10388807 Saccharomyces cerevisiae putative G protein, Gtr1p, which forms complexes with itself and a novel protein designated as Gtr2p, negatively regulates the Ran/Gsp1p G protein cycle through Gtr2p. Genetics 1999;152:853-867.
11073942 Novel G proteins, Rag C and Rag D, interact with GTP-binding proteins, Rag A and Rag B. J Biol Chem 2001;276:7246-7257.

GTP_EFTU
9311785 Visualization of elongation factor Tu on the Escherichia coli ribosome. Nature 1997;389:403-406.

BCAS2
12169396 Amplification of the BCAS2 gene at chromosome 1p13.3-21 in human primary breast cancer. Cancer Lett 2002;185:219-223.
9731529 Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex. Nat Genet 1998;20:46-50.