c2pfam

AT5G58720.1 :

Domain Description Evalue Bits GA Start End
DUF1296 Protein of unknown function (DUF1296) 0.0014 8 21.60 51 87
HOIP-UBA HOIP UBA domain pair 0.00041 9 22.40 59 85
UBA UBA/TS-N domain 0.017 4 21.10 67 87
HOIP-UBA HOIP UBA domain pair 0.34 0 22.40 199 228
UBA UBA/TS-N domain 0.0026 7 21.10 207 227
DUF1296 Protein of unknown function (DUF1296) 0.058 2 21.60 211 230
DUF5774 Family of unknown function (DUF5774) 0.00015 11 25.00 250 370
DUF1771 Domain of unknown function (DUF1771) 2.9E-18 55 22.90 356 419
Smr Smr domain 1.4E-06 18 21.30 428 485

519

DUF1296
HOIP-UBA
UBA
HOIP-UBA
UBA
DUF1296
DUF5774
DUF1771
Smr

References:

DUF5774

DUF1771

HOIP-UBA

DUF1296

Smr
10431172 Smr: a bacterial and eukaryotic homologue of the C-terminal region of the MutS2 family. Trends Biochem Sci 1999;24:298-300.

UBA
9846873 Structure of a human DNA repair protein UBA domain that interacts with HIV-1 Vpr. Nat Struct Biol 1998;5:1042-1047.
10413400 Comparative genomics of the Archaea (Euryarchaeota): evolution of conserved protein families, the stable core, and the variable shell. Genome Res 1999;9:608-628.
8596629 The structure of the Escherichia coli EF-Tu.EF-Ts complex at 2.5 A resolution. Nature 1996;379:511-518.

Domain	Description	Evalue	Bits	GA	Start	End
DUF1296	Protein of unknown function (DUF1296)	0.0014	8	21.60	51	87
HOIP-UBA	HOIP UBA domain pair	0.00041	9	22.40	59	85
UBA	UBA/TS-N domain	0.017	4	21.10	67	87
HOIP-UBA	HOIP UBA domain pair	0.34	0	22.40	199	228
UBA	UBA/TS-N domain	0.0026	7	21.10	207	227
DUF1296	Protein of unknown function (DUF1296)	0.058	2	21.60	211	230
DUF5774	Family of unknown function (DUF5774)	0.00015	11	25.00	250	370
DUF1771	Domain of unknown function (DUF1771)	2.9E-18	55	22.90	356	419
Smr	Smr domain	1.4E-06	18	21.30	428	485