c2pfam

AT5G60470.1 :

Domain Description Evalue Bits GA Start End
zf-H2C2_2 Zinc-finger double domain 0.036 4 40.00 62 73
zf-C2H2_4 C2H2-type zinc finger 6.7E-05 13 27.00 64 86
zf-C2H2 Zinc finger, C2H2 type 4E-06 16 20.80 64 86
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 2.7E-09 26 22.60 64 86
zf-met Zinc-finger of C2H2 type 2.8E-08 23 21.20 64 86
zf-C2H2_6 C2H2-type zinc finger 3.4E-06 16 25.00 64 86
zf-BED BED zinc finger 0.18 1 20.60 65 76
zf-H2C2_2 Zinc-finger double domain 0.56 0 40.00 78 87
zf-BED BED zinc finger 0.00022 10 20.60 128 151
zf-H2C2_2 Zinc-finger double domain 4.2E-06 16 40.00 129 150
zf-C2H2_4 C2H2-type zinc finger 0.012 6 27.00 141 159
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 0.29 1 22.60 141 160
zf-C2H2 Zinc finger, C2H2 type 0.004 7 20.80 142 159
zf-C2H2_6 C2H2-type zinc finger 0.0093 5 25.00 142 161
zf-C2H2_4 C2H2-type zinc finger 0.022 5 27.00 168 186
zf-C2H2 Zinc finger, C2H2 type 0.0014 8 20.80 171 186
zf-met Zinc-finger of C2H2 type 0.53 0 21.20 172 185

450

zf-H2C2_2
zf-C2H2_4
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-BED
zf-H2C2_2
zf-BED
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2
zf-C2H2_6
zf-C2H2_4
zf-C2H2
zf-met

References:

zf-C2H2
9171100 Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins. Nucleic Acids Res 1997;25:2464-2469.
12683994 Assessment by molecular dynamics simulations of the structural determinants of DNA-binding specificity for transcription factor Sp1. J Mol Biol 2003;328:9-32.

zf-H2C2_2

zf-C2H2_6

zf-C2H2_4

zf-met

zf-BED

zf-C2H2_jaz
10488071 JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization. J Biol Chem. 1999;274:27399-27406.

Domain	Description	Evalue	Bits	GA	Start	End
zf-H2C2_2	Zinc-finger double domain	0.036	4	40.00	62	73
zf-C2H2_4	C2H2-type zinc finger	6.7E-05	13	27.00	64	86
zf-C2H2	Zinc finger, C2H2 type	4E-06	16	20.80	64	86
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	2.7E-09	26	22.60	64	86
zf-met	Zinc-finger of C2H2 type	2.8E-08	23	21.20	64	86
zf-C2H2_6	C2H2-type zinc finger	3.4E-06	16	25.00	64	86
zf-BED	BED zinc finger	0.18	1	20.60	65	76
zf-H2C2_2	Zinc-finger double domain	0.56	0	40.00	78	87
zf-BED	BED zinc finger	0.00022	10	20.60	128	151
zf-H2C2_2	Zinc-finger double domain	4.2E-06	16	40.00	129	150
zf-C2H2_4	C2H2-type zinc finger	0.012	6	27.00	141	159
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	0.29	1	22.60	141	160
zf-C2H2	Zinc finger, C2H2 type	0.004	7	20.80	142	159
zf-C2H2_6	C2H2-type zinc finger	0.0093	5	25.00	142	161
zf-C2H2_4	C2H2-type zinc finger	0.022	5	27.00	168	186
zf-C2H2	Zinc finger, C2H2 type	0.0014	8	20.80	171	186
zf-met	Zinc-finger of C2H2 type	0.53	0	21.20	172	185