c2pfam

AT5G61480.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.7E-09 27 20.70 34 77
BetR BetR domain 0.27 1 20.80 84 107
LRR_4 Leucine Rich repeats (2 copies) 4.1E-05 13 27.00 84 118
LRR_8 Leucine rich repeat 6E-11 31 27.00 85 140
LRR_6 Leucine Rich repeat 0.02 5 23.40 105 118
LRR_1 Leucine Rich Repeat 0.009 6 20.60 107 125
LRR_4 Leucine Rich repeats (2 copies) 0.0001 12 27.00 129 165
LRR_6 Leucine Rich repeat 0.0057 6 23.40 129 142
LRR_1 Leucine Rich Repeat 0.0015 9 20.60 130 152
LRR_8 Leucine rich repeat 0.0045 6 27.00 162 213
LRR_1 Leucine Rich Repeat 0.82 0 20.60 179 196
LRR_4 Leucine Rich repeats (2 copies) 0.018 5 27.00 201 237
LRR_6 Leucine Rich repeat 0.84 0 23.40 201 215
LRR_1 Leucine Rich Repeat 0.53 1 20.60 202 219
LRR_4 Leucine Rich repeats (2 copies) 0.0032 7 27.00 226 262
LRR_8 Leucine rich repeat 9.4E-07 18 27.00 226 284
LRR_1 Leucine Rich Repeat 0.64 1 20.60 227 245
LRR_6 Leucine Rich repeat 0.26 1 23.40 249 263
LRR_1 Leucine Rich Repeat 0.0007 10 20.60 250 272
LRR_4 Leucine Rich repeats (2 copies) 1.6E-06 18 27.00 250 289
LRR_8 Leucine rich repeat 1.3E-09 27 27.00 273 333
LRR_4 Leucine Rich repeats (2 copies) 2.6E-07 20 27.00 274 313
LRR_1 Leucine Rich Repeat 0.2 2 20.60 274 296
LRR_4 Leucine Rich repeats (2 copies) 5.9E-06 16 27.00 297 333
LRR_6 Leucine Rich repeat 0.045 4 23.40 297 311
LRR_1 Leucine Rich Repeat 0.0061 7 20.60 298 319
LRR_4 Leucine Rich repeats (2 copies) 3.8E-06 17 27.00 321 358
LRR_4 Leucine Rich repeats (2 copies) 0.00031 11 27.00 345 383
LRR_8 Leucine rich repeat 1.8E-09 27 27.00 345 404
LRR_1 Leucine Rich Repeat 0.73 1 20.60 347 363
LRR_1 Leucine Rich Repeat 0.00053 10 20.60 370 391
LRR_4 Leucine Rich repeats (2 copies) 0.34 1 27.00 370 387
LRR_8 Leucine rich repeat 3.4E-08 23 27.00 426 475
LRR_6 Leucine Rich repeat 0.0047 7 23.40 440 456
LRR_4 Leucine Rich repeats (2 copies) 3.4E-06 17 27.00 442 475
LRR_1 Leucine Rich Repeat 0.0062 7 20.60 442 461
LRR_1 Leucine Rich Repeat 0.0098 6 20.60 467 501
LRR_4 Leucine Rich repeats (2 copies) 0.003 8 27.00 489 524
LRR_8 Leucine rich repeat 2.4E-07 20 27.00 517 572
LRR_1 Leucine Rich Repeat 0.31 2 20.60 517 535
LRR_4 Leucine Rich repeats (2 copies) 0.0062 7 27.00 518 550
LRR_6 Leucine Rich repeat 0.082 3 23.40 534 549
BetR BetR domain 0.0032 7 20.80 536 564
LRR_4 Leucine Rich repeats (2 copies) 0.0006 10 27.00 537 573
LRR_1 Leucine Rich Repeat 0.014 6 20.60 538 558
LRR_8 Leucine rich repeat 3.6E-05 13 27.00 562 609
LRR_6 Leucine Rich repeat 0.41 1 23.40 564 574
LRR_4 Leucine Rich repeats (2 copies) 0.00035 10 27.00 565 601
LRR_1 Leucine Rich Repeat 0.14 3 20.60 566 581
LRR_6 Leucine Rich repeat 0.022 5 23.40 583 598
LRR_1 Leucine Rich Repeat 0.47 1 20.60 587 602
Pkinase Protein kinase domain 0 162 20.40 722 993
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 139 23.10 722 994
APH Phosphotransferase enzyme family 1.3E-05 14 22.40 843 874

1041

LRRNT_2
BetR
LRR_4
LRR_8
LRR_6
LRR_1
LRR_4
LRR_6
LRR_1
LRR_8
LRR_1
LRR_4
LRR_6
LRR_1
LRR_4
LRR_8
LRR_1
LRR_6
LRR_1
LRR_4
LRR_8
LRR_4
LRR_1
LRR_4
LRR_6
LRR_1
LRR_4
LRR_4
LRR_8
LRR_1
LRR_1
LRR_4
LRR_8
LRR_6
LRR_4
LRR_1
LRR_1
LRR_4
LRR_8
LRR_1
LRR_4
LRR_6
BetR
LRR_4
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_1
Pkinase
PK_Tyr_Ser-Thr
APH

References:

LRR_8

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

BetR

LRR_4

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.7E-09	27	20.70	34	77
BetR	BetR domain	0.27	1	20.80	84	107
LRR_4	Leucine Rich repeats (2 copies)	4.1E-05	13	27.00	84	118
LRR_8	Leucine rich repeat	6E-11	31	27.00	85	140
LRR_6	Leucine Rich repeat	0.02	5	23.40	105	118
LRR_1	Leucine Rich Repeat	0.009	6	20.60	107	125
LRR_4	Leucine Rich repeats (2 copies)	0.0001	12	27.00	129	165
LRR_6	Leucine Rich repeat	0.0057	6	23.40	129	142
LRR_1	Leucine Rich Repeat	0.0015	9	20.60	130	152
LRR_8	Leucine rich repeat	0.0045	6	27.00	162	213
LRR_1	Leucine Rich Repeat	0.82	0	20.60	179	196
LRR_4	Leucine Rich repeats (2 copies)	0.018	5	27.00	201	237
LRR_6	Leucine Rich repeat	0.84	0	23.40	201	215
LRR_1	Leucine Rich Repeat	0.53	1	20.60	202	219
LRR_4	Leucine Rich repeats (2 copies)	0.0032	7	27.00	226	262
LRR_8	Leucine rich repeat	9.4E-07	18	27.00	226	284
LRR_1	Leucine Rich Repeat	0.64	1	20.60	227	245
LRR_6	Leucine Rich repeat	0.26	1	23.40	249	263
LRR_1	Leucine Rich Repeat	0.0007	10	20.60	250	272
LRR_4	Leucine Rich repeats (2 copies)	1.6E-06	18	27.00	250	289
LRR_8	Leucine rich repeat	1.3E-09	27	27.00	273	333
LRR_4	Leucine Rich repeats (2 copies)	2.6E-07	20	27.00	274	313
LRR_1	Leucine Rich Repeat	0.2	2	20.60	274	296
LRR_4	Leucine Rich repeats (2 copies)	5.9E-06	16	27.00	297	333
LRR_6	Leucine Rich repeat	0.045	4	23.40	297	311
LRR_1	Leucine Rich Repeat	0.0061	7	20.60	298	319
LRR_4	Leucine Rich repeats (2 copies)	3.8E-06	17	27.00	321	358
LRR_4	Leucine Rich repeats (2 copies)	0.00031	11	27.00	345	383
LRR_8	Leucine rich repeat	1.8E-09	27	27.00	345	404
LRR_1	Leucine Rich Repeat	0.73	1	20.60	347	363
LRR_1	Leucine Rich Repeat	0.00053	10	20.60	370	391
LRR_4	Leucine Rich repeats (2 copies)	0.34	1	27.00	370	387
LRR_8	Leucine rich repeat	3.4E-08	23	27.00	426	475
LRR_6	Leucine Rich repeat	0.0047	7	23.40	440	456
LRR_4	Leucine Rich repeats (2 copies)	3.4E-06	17	27.00	442	475
LRR_1	Leucine Rich Repeat	0.0062	7	20.60	442	461
LRR_1	Leucine Rich Repeat	0.0098	6	20.60	467	501
LRR_4	Leucine Rich repeats (2 copies)	0.003	8	27.00	489	524
LRR_8	Leucine rich repeat	2.4E-07	20	27.00	517	572
LRR_1	Leucine Rich Repeat	0.31	2	20.60	517	535
LRR_4	Leucine Rich repeats (2 copies)	0.0062	7	27.00	518	550
LRR_6	Leucine Rich repeat	0.082	3	23.40	534	549
BetR	BetR domain	0.0032	7	20.80	536	564
LRR_4	Leucine Rich repeats (2 copies)	0.0006	10	27.00	537	573
LRR_1	Leucine Rich Repeat	0.014	6	20.60	538	558
LRR_8	Leucine rich repeat	3.6E-05	13	27.00	562	609
LRR_6	Leucine Rich repeat	0.41	1	23.40	564	574
LRR_4	Leucine Rich repeats (2 copies)	0.00035	10	27.00	565	601
LRR_1	Leucine Rich Repeat	0.14	3	20.60	566	581
LRR_6	Leucine Rich repeat	0.022	5	23.40	583	598
LRR_1	Leucine Rich Repeat	0.47	1	20.60	587	602
Pkinase	Protein kinase domain	0	162	20.40	722	993
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	139	23.10	722	994
APH	Phosphotransferase enzyme family	1.3E-05	14	22.40	843	874