c2pfam

AT5G63200.1 :

Domain Description Evalue Bits GA Start End
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.38 1 27.20 135 166
TPR_9 Tetratricopeptide repeat 0.1 3 35.00 137 165
TPR_11 TPR repeat 0.046 4 26.80 137 154
TPR_16 Tetratricopeptide repeat 0.0025 9 32.70 137 166
TPR_17 Tetratricopeptide repeat 0.0054 8 24.40 137 160
TPR_2 Tetratricopeptide repeat 4.4E-05 14 22.40 140 169
TPR_8 Tetratricopeptide repeat 5.4E-05 14 25.70 140 169
TPR_12 Tetratricopeptide repeat 0.00034 11 30.10 140 170
TPR_1 Tetratricopeptide repeat 6.8E-05 13 20.40 142 169
TPR_14 Tetratricopeptide repeat 0.19 3 23.50 142 168
TPR_6 Tetratricopeptide repeat 0.025 6 26.30 142 165
TPR_7 Tetratricopeptide repeat 0.00092 10 27.90 143 165
TPR_11 TPR repeat 0.068 3 26.80 149 169
TPR_11 TPR repeat 0.28 1 26.80 217 245
TPR_17 Tetratricopeptide repeat 0.0088 7 24.40 224 251
TPR_9 Tetratricopeptide repeat 0.02 5 35.00 226 264
TPR_12 Tetratricopeptide repeat 5.4E-05 14 30.10 231 290
TPR_1 Tetratricopeptide repeat 0.054 4 20.40 231 252
TPR_2 Tetratricopeptide repeat 0.033 5 22.40 231 264
PPR PPR repeat 0.22 3 25.00 233 256
TPR_16 Tetratricopeptide repeat 1.4E-05 16 32.70 240 288
TPR_11 TPR repeat 3.6E-05 14 26.80 240 279
TPR_19 Tetratricopeptide repeat 3.2E-07 21 25.00 242 300
TPR_9 Tetratricopeptide repeat 6.1E-05 14 35.00 245 299
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.38 1 27.20 250 305
TPR_17 Tetratricopeptide repeat 0.00097 10 24.40 258 280
TPR_1 Tetratricopeptide repeat 5.8E-05 13 20.40 266 289
TPR_8 Tetratricopeptide repeat 0.00026 12 25.70 266 289
TPR_6 Tetratricopeptide repeat 0.0078 7 26.30 266 292
TPR_4 Tetratricopeptide repeat 0.29 3 22.00 267 280
TPR_7 Tetratricopeptide repeat 0.00012 13 27.90 267 290
TPR_2 Tetratricopeptide repeat 0.00015 12 22.40 267 295
TPR_10 Tetratricopeptide repeat 0.015 6 27.50 267 282
TPR_14 Tetratricopeptide repeat 0.0055 8 23.50 269 306
PPR PPR repeat 0.49 1 25.00 274 292
TPR_17 Tetratricopeptide repeat 0.15 3 24.40 287 311
ChAPs ChAPs (Chs5p-Arf1p-binding proteins) 0.0037 6 19.90 333 372
TPR_9 Tetratricopeptide repeat 0.00047 11 35.00 338 386
TPR_8 Tetratricopeptide repeat 0.15 3 25.70 338 352
TPR_2 Tetratricopeptide repeat 0.39 2 22.40 339 352
TPR_16 Tetratricopeptide repeat 0.00012 13 32.70 339 370
TPR_14 Tetratricopeptide repeat 0.079 5 23.50 339 361
TPR_11 TPR repeat 1.4E-05 15 26.80 341 368
TPR_17 Tetratricopeptide repeat 8.2E-07 20 24.40 342 370
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 3E-05 15 27.20 343 414
TPR_19 Tetratricopeptide repeat 8.1E-05 13 25.00 345 387
TPR_12 Tetratricopeptide repeat 0.00011 13 30.10 353 383
TPR_8 Tetratricopeptide repeat 3.5E-08 24 25.70 354 387
TPR_2 Tetratricopeptide repeat 2.1E-09 27 22.40 354 387
TPR_4 Tetratricopeptide repeat 0.4 2 22.00 354 370
TPR_14 Tetratricopeptide repeat 0.00016 13 23.50 355 393
TPR_1 Tetratricopeptide repeat 2.1E-09 27 20.40 356 387
TPR_7 Tetratricopeptide repeat 0.022 5 27.90 356 387
DUF3128 Protein of unknown function (DUF3128) 0.023 6 21.20 356 402
TPR_6 Tetratricopeptide repeat 0.0016 10 26.30 356 386
TPR_10 Tetratricopeptide repeat 0.0027 8 27.50 359 381
TPR_11 TPR repeat 0.093 3 26.80 372 386
TPR_1 Tetratricopeptide repeat 0.25 2 20.40 435 453
TPR_2 Tetratricopeptide repeat 0.94 0 22.40 435 453
TPR_14 Tetratricopeptide repeat 0.71 2 23.50 465 490
TPR_11 TPR repeat 0.038 4 26.80 466 490
TPR_19 Tetratricopeptide repeat 0.81 1 25.00 467 483
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.0074 7 27.20 467 542
TPR_2 Tetratricopeptide repeat 0.19 3 22.40 486 510
TPR_12 Tetratricopeptide repeat 8.2E-06 16 30.10 487 548
TPR_8 Tetratricopeptide repeat 0.45 2 25.70 497 515
TPR_19 Tetratricopeptide repeat 0.069 4 25.00 497 554
TPR_16 Tetratricopeptide repeat 0.0015 10 32.70 497 545
DUF3128 Protein of unknown function (DUF3128) 0.006 7 21.20 510 547
TPR_2 Tetratricopeptide repeat 7.3E-06 16 22.40 518 547
TPR_1 Tetratricopeptide repeat 4.6E-07 20 20.40 518 547
TPR_8 Tetratricopeptide repeat 0.0018 9 25.70 519 549
TPR_7 Tetratricopeptide repeat 4.6E-05 14 27.90 519 550
TPR_14 Tetratricopeptide repeat 0.014 7 23.50 519 551
TPR_4 Tetratricopeptide repeat 0.36 2 22.00 519 539
TPR_10 Tetratricopeptide repeat 0.00021 12 27.50 521 549
ChAPs ChAPs (Chs5p-Arf1p-binding proteins) 0.059 3 19.90 530 606
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.15 3 27.20 533 611
TPR_11 TPR repeat 0.26 1 26.80 533 548
TPR_17 Tetratricopeptide repeat 0.18 3 24.40 553 570
TPR_12 Tetratricopeptide repeat 7.4E-12 36 30.10 553 616
TPR_1 Tetratricopeptide repeat 1.7E-07 21 20.40 555 586
TPR_2 Tetratricopeptide repeat 2.2E-07 21 22.40 555 585
TPR_10 Tetratricopeptide repeat 0.00013 12 27.50 555 582
TPR_7 Tetratricopeptide repeat 0.026 5 27.90 556 581
TPR_8 Tetratricopeptide repeat 6E-08 23 25.70 556 584
TPR_16 Tetratricopeptide repeat 9E-07 20 32.70 558 606
TPR_6 Tetratricopeptide repeat 0.23 3 26.30 558 581
TPR_14 Tetratricopeptide repeat 0.014 7 23.50 559 594
TPR_11 TPR repeat 4.4E-09 26 26.80 560 597
TPR_9 Tetratricopeptide repeat 0.001 10 35.00 560 630
TPR_19 Tetratricopeptide repeat 5.1E-06 17 25.00 566 627
TPR_17 Tetratricopeptide repeat 2.8E-05 15 24.40 576 597
TPR_8 Tetratricopeptide repeat 6.8E-06 17 25.70 587 617
TPR_2 Tetratricopeptide repeat 4E-07 20 22.40 587 617
TPR_1 Tetratricopeptide repeat 1.7E-07 21 20.40 587 617
TPR_12 Tetratricopeptide repeat 1.8E-06 19 30.10 588 634
TPR_7 Tetratricopeptide repeat 1.1E-06 19 27.90 589 616
TPR_10 Tetratricopeptide repeat 0.00073 10 27.50 589 615
PPR PPR repeat 0.02 6 25.00 590 612
TPR_6 Tetratricopeptide repeat 0.19 3 26.30 592 612
TPR_14 Tetratricopeptide repeat 0.11 4 23.50 593 618

649

ANAPC3
TPR_9
TPR_11
TPR_16
TPR_17
TPR_2
TPR_8
TPR_12
TPR_1
TPR_14
TPR_6
TPR_7
TPR_11
TPR_11
TPR_17
TPR_9
TPR_12
TPR_1
TPR_2
PPR
TPR_16
TPR_11
TPR_19
TPR_9
ANAPC3
TPR_17
TPR_1
TPR_8
TPR_6
TPR_4
TPR_7
TPR_2
TPR_10
TPR_14
PPR
TPR_17
ChAPs
TPR_9
TPR_8
TPR_2
TPR_16
TPR_14
TPR_11
TPR_17
ANAPC3
TPR_19
TPR_12
TPR_8
TPR_2
TPR_4
TPR_14
TPR_1
TPR_7
DUF3128
TPR_6
TPR_10
TPR_11
TPR_1
TPR_2
TPR_14
TPR_11
TPR_19
ANAPC3
TPR_2
TPR_12
TPR_8
TPR_19
TPR_16
DUF3128
TPR_2
TPR_1
TPR_8
TPR_7
TPR_14
TPR_4
TPR_10
ChAPs
ANAPC3
TPR_11
TPR_17
TPR_12
TPR_1
TPR_2
TPR_10
TPR_7
TPR_8
TPR_16
TPR_6
TPR_14
TPR_11
TPR_9
TPR_19
TPR_17
TPR_8
TPR_2
TPR_1
TPR_12
TPR_7
TPR_10
PPR
TPR_6
TPR_14

References:

TPR_7

TPR_6

TPR_4

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_19

TPR_17

TPR_16

TPR_14

TPR_12

TPR_11

TPR_10

ChAPs
16498409 Arf1p, Chs5p and the ChAPs are required for export of specialized cargo from the Golgi. EMBO J. 2006;25:943-954.

DUF3128

ANAPC3

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

TPR_9

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.38	1	27.20	135	166
TPR_9	Tetratricopeptide repeat	0.1	3	35.00	137	165
TPR_11	TPR repeat	0.046	4	26.80	137	154
TPR_16	Tetratricopeptide repeat	0.0025	9	32.70	137	166
TPR_17	Tetratricopeptide repeat	0.0054	8	24.40	137	160
TPR_2	Tetratricopeptide repeat	4.4E-05	14	22.40	140	169
TPR_8	Tetratricopeptide repeat	5.4E-05	14	25.70	140	169
TPR_12	Tetratricopeptide repeat	0.00034	11	30.10	140	170
TPR_1	Tetratricopeptide repeat	6.8E-05	13	20.40	142	169
TPR_14	Tetratricopeptide repeat	0.19	3	23.50	142	168
TPR_6	Tetratricopeptide repeat	0.025	6	26.30	142	165
TPR_7	Tetratricopeptide repeat	0.00092	10	27.90	143	165
TPR_11	TPR repeat	0.068	3	26.80	149	169
TPR_11	TPR repeat	0.28	1	26.80	217	245
TPR_17	Tetratricopeptide repeat	0.0088	7	24.40	224	251
TPR_9	Tetratricopeptide repeat	0.02	5	35.00	226	264
TPR_12	Tetratricopeptide repeat	5.4E-05	14	30.10	231	290
TPR_1	Tetratricopeptide repeat	0.054	4	20.40	231	252
TPR_2	Tetratricopeptide repeat	0.033	5	22.40	231	264
PPR	PPR repeat	0.22	3	25.00	233	256
TPR_16	Tetratricopeptide repeat	1.4E-05	16	32.70	240	288
TPR_11	TPR repeat	3.6E-05	14	26.80	240	279
TPR_19	Tetratricopeptide repeat	3.2E-07	21	25.00	242	300
TPR_9	Tetratricopeptide repeat	6.1E-05	14	35.00	245	299
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.38	1	27.20	250	305
TPR_17	Tetratricopeptide repeat	0.00097	10	24.40	258	280
TPR_1	Tetratricopeptide repeat	5.8E-05	13	20.40	266	289
TPR_8	Tetratricopeptide repeat	0.00026	12	25.70	266	289
TPR_6	Tetratricopeptide repeat	0.0078	7	26.30	266	292
TPR_4	Tetratricopeptide repeat	0.29	3	22.00	267	280
TPR_7	Tetratricopeptide repeat	0.00012	13	27.90	267	290
TPR_2	Tetratricopeptide repeat	0.00015	12	22.40	267	295
TPR_10	Tetratricopeptide repeat	0.015	6	27.50	267	282
TPR_14	Tetratricopeptide repeat	0.0055	8	23.50	269	306
PPR	PPR repeat	0.49	1	25.00	274	292
TPR_17	Tetratricopeptide repeat	0.15	3	24.40	287	311
ChAPs	ChAPs (Chs5p-Arf1p-binding proteins)	0.0037	6	19.90	333	372
TPR_9	Tetratricopeptide repeat	0.00047	11	35.00	338	386
TPR_8	Tetratricopeptide repeat	0.15	3	25.70	338	352
TPR_2	Tetratricopeptide repeat	0.39	2	22.40	339	352
TPR_16	Tetratricopeptide repeat	0.00012	13	32.70	339	370
TPR_14	Tetratricopeptide repeat	0.079	5	23.50	339	361
TPR_11	TPR repeat	1.4E-05	15	26.80	341	368
TPR_17	Tetratricopeptide repeat	8.2E-07	20	24.40	342	370
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	3E-05	15	27.20	343	414
TPR_19	Tetratricopeptide repeat	8.1E-05	13	25.00	345	387
TPR_12	Tetratricopeptide repeat	0.00011	13	30.10	353	383
TPR_8	Tetratricopeptide repeat	3.5E-08	24	25.70	354	387
TPR_2	Tetratricopeptide repeat	2.1E-09	27	22.40	354	387
TPR_4	Tetratricopeptide repeat	0.4	2	22.00	354	370
TPR_14	Tetratricopeptide repeat	0.00016	13	23.50	355	393
TPR_1	Tetratricopeptide repeat	2.1E-09	27	20.40	356	387
TPR_7	Tetratricopeptide repeat	0.022	5	27.90	356	387
DUF3128	Protein of unknown function (DUF3128)	0.023	6	21.20	356	402
TPR_6	Tetratricopeptide repeat	0.0016	10	26.30	356	386
TPR_10	Tetratricopeptide repeat	0.0027	8	27.50	359	381
TPR_11	TPR repeat	0.093	3	26.80	372	386
TPR_1	Tetratricopeptide repeat	0.25	2	20.40	435	453
TPR_2	Tetratricopeptide repeat	0.94	0	22.40	435	453
TPR_14	Tetratricopeptide repeat	0.71	2	23.50	465	490
TPR_11	TPR repeat	0.038	4	26.80	466	490
TPR_19	Tetratricopeptide repeat	0.81	1	25.00	467	483
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.0074	7	27.20	467	542
TPR_2	Tetratricopeptide repeat	0.19	3	22.40	486	510
TPR_12	Tetratricopeptide repeat	8.2E-06	16	30.10	487	548
TPR_8	Tetratricopeptide repeat	0.45	2	25.70	497	515
TPR_19	Tetratricopeptide repeat	0.069	4	25.00	497	554
TPR_16	Tetratricopeptide repeat	0.0015	10	32.70	497	545
DUF3128	Protein of unknown function (DUF3128)	0.006	7	21.20	510	547
TPR_2	Tetratricopeptide repeat	7.3E-06	16	22.40	518	547
TPR_1	Tetratricopeptide repeat	4.6E-07	20	20.40	518	547
TPR_8	Tetratricopeptide repeat	0.0018	9	25.70	519	549
TPR_7	Tetratricopeptide repeat	4.6E-05	14	27.90	519	550
TPR_14	Tetratricopeptide repeat	0.014	7	23.50	519	551
TPR_4	Tetratricopeptide repeat	0.36	2	22.00	519	539
TPR_10	Tetratricopeptide repeat	0.00021	12	27.50	521	549
ChAPs	ChAPs (Chs5p-Arf1p-binding proteins)	0.059	3	19.90	530	606
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.15	3	27.20	533	611
TPR_11	TPR repeat	0.26	1	26.80	533	548
TPR_17	Tetratricopeptide repeat	0.18	3	24.40	553	570
TPR_12	Tetratricopeptide repeat	7.4E-12	36	30.10	553	616
TPR_1	Tetratricopeptide repeat	1.7E-07	21	20.40	555	586
TPR_2	Tetratricopeptide repeat	2.2E-07	21	22.40	555	585
TPR_10	Tetratricopeptide repeat	0.00013	12	27.50	555	582
TPR_7	Tetratricopeptide repeat	0.026	5	27.90	556	581
TPR_8	Tetratricopeptide repeat	6E-08	23	25.70	556	584
TPR_16	Tetratricopeptide repeat	9E-07	20	32.70	558	606
TPR_6	Tetratricopeptide repeat	0.23	3	26.30	558	581
TPR_14	Tetratricopeptide repeat	0.014	7	23.50	559	594
TPR_11	TPR repeat	4.4E-09	26	26.80	560	597
TPR_9	Tetratricopeptide repeat	0.001	10	35.00	560	630
TPR_19	Tetratricopeptide repeat	5.1E-06	17	25.00	566	627
TPR_17	Tetratricopeptide repeat	2.8E-05	15	24.40	576	597
TPR_8	Tetratricopeptide repeat	6.8E-06	17	25.70	587	617
TPR_2	Tetratricopeptide repeat	4E-07	20	22.40	587	617
TPR_1	Tetratricopeptide repeat	1.7E-07	21	20.40	587	617
TPR_12	Tetratricopeptide repeat	1.8E-06	19	30.10	588	634
TPR_7	Tetratricopeptide repeat	1.1E-06	19	27.90	589	616
TPR_10	Tetratricopeptide repeat	0.00073	10	27.50	589	615
PPR	PPR repeat	0.02	6	25.00	590	612
TPR_6	Tetratricopeptide repeat	0.19	3	26.30	592	612
TPR_14	Tetratricopeptide repeat	0.11	4	23.50	593	618