c2pfam

AT1G29220.1 :

Domain Description Evalue Bits GA Start End
XAP5 XAP5 protein 0.00017 10 25.00 4 60
AP-5_subunit_s1 AP-5 complex subunit sigma-1 3.9E-05 12 30.70 7 65
TipE Na+ channel auxiliary subunit TipE 0.0018 6 26.00 7 57
Afi1 Docking domain of Afi1 for Arf3 in vesicle trafficking 0.0023 7 25.50 13 63
RRN3 RNA polymerase I specific transcription initiation factor RRN3 0.0017 6 20.60 21 61
HCNGP HCNGP-like protein 1.3E-29 92 21.30 133 226
AP-5_subunit_s1 AP-5 complex subunit sigma-1 0.47 -1 30.70 216 238
XAP5 XAP5 protein 0.52 -1 25.00 218 235
Afi1 Docking domain of Afi1 for Arf3 in vesicle trafficking 0.54 -1 25.50 221 228

351

XAP5
AP-5_subunit_s1
TipE
Afi1
RRN3
HCNGP
AP-5_subunit_s1
XAP5
Afi1

References:

XAP5
9339379 Differential expression of XAP5, a candidate disease gene. Genomics 1997;45:216-219.
10534398 Human and mouse XAP-5 and XAP-5-like (X5L) genes: identification of an ancient functional retroposon differentially expressed in testis. Genomics 1999;61:125-132.

HCNGP

TipE

RRN3
8670901 RRN3 gene of Saccharomyces cerevisiae encodes an essential RNA polymerase I transcription factor which interacts with the polymerase independently of DNA template. EMBO J 1996;15:3964-3973.

AP-5_subunit_s1

Afi1

Domain	Description	Evalue	Bits	GA	Start	End
XAP5	XAP5 protein	0.00017	10	25.00	4	60
AP-5_subunit_s1	AP-5 complex subunit sigma-1	3.9E-05	12	30.70	7	65
TipE	Na+ channel auxiliary subunit TipE	0.0018	6	26.00	7	57
Afi1	Docking domain of Afi1 for Arf3 in vesicle trafficking	0.0023	7	25.50	13	63
RRN3	RNA polymerase I specific transcription initiation factor RRN3	0.0017	6	20.60	21	61
HCNGP	HCNGP-like protein	1.3E-29	92	21.30	133	226
AP-5_subunit_s1	AP-5 complex subunit sigma-1	0.47	-1	30.70	216	238
XAP5	XAP5 protein	0.52	-1	25.00	218	235
Afi1	Docking domain of Afi1 for Arf3 in vesicle trafficking	0.54	-1	25.50	221	228