c2pfam

AT5G66360.1 :

Domain Description Evalue Bits GA Start End
RrnaAD Ribosomal RNA adenine dimethylase 0 140 21.60 65 213
CMAS Cyclopropane-fatty-acyl-phospholipid synthase 4.7E-07 20 19.80 78 159
Ubie_methyltran ubiE/COQ5 methyltransferase family 1.2E-06 18 20.10 82 152
PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6.7E-06 16 20.30 87 146
PrmA Ribosomal protein L11 methyltransferase (PrmA) 9.4E-09 25 20.10 87 166
Methyltransf_23 Methyltransferase domain 5.2E-07 20 27.00 87 160
NodS Nodulation protein S (NodS) 5.2E-06 17 20.10 88 166
DREV DREV methyltransferase 8.3E-06 15 20.30 89 130
MTS Methyltransferase small domain 9.2E-10 29 21.20 89 167
Methyltransf_31 Methyltransferase domain 1.5E-09 28 27.00 91 172
PRMT5 PRMT5 arginine-N-methyltransferase 3.4E-05 14 19.70 91 160
Methyltransf_28 Putative S-adenosyl-L-methionine-dependent methyltransferase 0.00016 12 23.30 92 125
Methyltransf_4 Putative methyltransferase 3.2E-05 14 20.10 92 148
Cons_hypoth95 Conserved hypothetical protein 95 3.3E-05 14 20.30 92 168
Methyltransf_25 Methyltransferase domain 2.9E-14 44 27.00 93 161
Methyltransf_11 Methyltransferase domain 6.8E-11 33 21.20 94 161
Methyltransf_12 Methyltransferase domain 1.2E-10 33 30.00 94 161
DNA_methylase C-5 cytosine-specific DNA methylase 0.00052 10 20.20 98 163
UPF0020 Putative RNA methylase family UPF0020 5.6E-07 20 20.90 110 167
RrnaAD Ribosomal RNA adenine dimethylase 4.5E-05 13 21.60 212 261

352

RrnaAD
CMAS
Ubie_methyltran
PCMT
PrmA
Methyltransf_23
NodS
DREV
MTS
Methyltransf_31
PRMT5
Methyltransf_28
Methyltransf_4
Cons_hypoth95
Methyltransf_25
Methyltransf_11
Methyltransf_12
DNA_methylase
UPF0020
RrnaAD

References:

DREV
11132146 The mouse and human IGSF6 (DORA) genes map to the inflammatory bowel disease 1 locus and are embedded in an intron of a gene of unknown function. Immunogenetics 2000;52:112-120.

Ubie_methyltran

Methyltransf_4

CMAS
8917504 A common mechanism for the biosynthesis of methoxy and cyclopropyl mycolic acids in Mycobacterium tuberculosis. Proc Natl Acad Sci U S A 1996;93:12828-12833.
7592990 The biosynthesis of cyclopropanated mycolic acids in Mycobacterium tuberculosis. Identification and functional analysis of CMAS-2. J Biol Chem 1995;270:27292-27298.

PRMT5
8943016 The highly conserved skb1 gene encodes a protein that interacts with Shk1, a fission yeast Ste20/PAK homolog. Proc Natl Acad Sci U S A 1996;93:13802-13807.
9843966 Negative regulation of mitosis in fission yeast by the shk1 interacting protein skb1 and its human homolog, Skb1Hs. Proc Natl Acad Sci U S A 1998;95:14781-14786.
10531356 The human homologue of the yeast proteins Skb1 and Hsl7p interacts with Jak kinases and contains protein methyltransferase activity. J Biol Chem 1999;274:31531-31542.
11152681 Prmt5, which forms distinct homo-oligomers, is a member of the protein-arginine methyltransferase family. J Biol Chem 2001;276:11393-11401.

PrmA
8226664 Cotranscription of two genes necessary for ribosomal protein L11 methylation (prmA) and pantothenate transport (panF) in Escherichia coli K-12. J Bacteriol 1993;175:7178-7188.

Cons_hypoth95

Methyltransf_28

Methyltransf_25

NodS
11344149 Rhizobial NodL O-acetyl transferase and NodS N-methyl transferase functionally interfere in production of modified Nod factors. J Bacteriol 2001;183:3408-3416.

Methyltransf_23

PCMT

Methyltransf_11

UPF0020
11295541 THUMP - a predicted RNA-binding domain shared by 4-thiouridine, pseudouridine synthases and RNA methylases. Trends Biochem Sci 2001;26:215-217.

Methyltransf_31

RrnaAD
9187657 Solution structure of an rRNA methyltransferase (ErmAM) that confers macrolide-lincosamide-streptogramin antibiotic resistance. Nat Struct Biol 1997;4:483-489.

Methyltransf_12

MTS

DNA_methylase

Domain	Description	Evalue	Bits	GA	Start	End
RrnaAD	Ribosomal RNA adenine dimethylase	0	140	21.60	65	213
CMAS	Cyclopropane-fatty-acyl-phospholipid synthase	4.7E-07	20	19.80	78	159
Ubie_methyltran	ubiE/COQ5 methyltransferase family	1.2E-06	18	20.10	82	152
PCMT	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	6.7E-06	16	20.30	87	146
PrmA	Ribosomal protein L11 methyltransferase (PrmA)	9.4E-09	25	20.10	87	166
Methyltransf_23	Methyltransferase domain	5.2E-07	20	27.00	87	160
NodS	Nodulation protein S (NodS)	5.2E-06	17	20.10	88	166
DREV	DREV methyltransferase	8.3E-06	15	20.30	89	130
MTS	Methyltransferase small domain	9.2E-10	29	21.20	89	167
Methyltransf_31	Methyltransferase domain	1.5E-09	28	27.00	91	172
PRMT5	PRMT5 arginine-N-methyltransferase	3.4E-05	14	19.70	91	160
Methyltransf_28	Putative S-adenosyl-L-methionine-dependent methyltransferase	0.00016	12	23.30	92	125
Methyltransf_4	Putative methyltransferase	3.2E-05	14	20.10	92	148
Cons_hypoth95	Conserved hypothetical protein 95	3.3E-05	14	20.30	92	168
Methyltransf_25	Methyltransferase domain	2.9E-14	44	27.00	93	161
Methyltransf_11	Methyltransferase domain	6.8E-11	33	21.20	94	161
Methyltransf_12	Methyltransferase domain	1.2E-10	33	30.00	94	161
DNA_methylase	C-5 cytosine-specific DNA methylase	0.00052	10	20.20	98	163
UPF0020	Putative RNA methylase family UPF0020	5.6E-07	20	20.90	110	167
RrnaAD	Ribosomal RNA adenine dimethylase	4.5E-05	13	21.60	212	261