c2pfam

AT5G67560.1 :

Domain Description Evalue Bits GA Start End
Arf ADP-ribosylation factor family 0 156 20.30 9 178
G-alpha G-protein alpha subunit 0.11 1 20.10 17 38
GTP_EFTU Elongation factor Tu GTP binding domain 0.2 1 20.20 21 39
FeoB_N Ferrous iron transport protein B 0.00034 10 21.20 22 41
MMR_HSR1 GTPase of unknown function 1.1E-09 28 24.50 22 130
Roc Ras of Complex, Roc, domain of DAPkinase 4.6E-19 58 27.00 22 133
SRPRB Signal recognition particle receptor beta subunit 5.4E-12 35 20.50 22 144
Dynamin_N Dynamin family 0.0051 6 21.00 23 39
Gtr1_RagA Gtr1/RagA G protein conserved region 1.3E-11 34 20.10 24 140
Ras Ras family 5.3E-22 68 20.80 24 179
G-alpha G-protein alpha subunit 5.8E-08 22 20.10 49 103
GTP_EFTU Elongation factor Tu GTP binding domain 1.3E-07 21 20.20 61 180
Dynamin_N Dynamin family 0.0051 6 21.00 79 121
MMR_HSR1_Xtn C-terminal region of MMR_HSR1 domain 3.8E-06 17 35.20 105 174
Dynamin_N Dynamin family 0.43 0 21.00 131 166
MMR_HSR1 GTPase of unknown function 0.11 2 24.50 131 176

184

Arf
G-alpha
GTP_EFTU
FeoB_N
MMR_HSR1
Roc
SRPRB
Dynamin_N
Gtr1_RagA
Ras
G-alpha
GTP_EFTU
Dynamin_N
MMR_HSR1_Xtn
Dynamin_N
MMR_HSR1

References:

MMR_HSR1
8180467 Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. Mamm Genome 1994;5:100-105.

Gtr1_RagA
1620108 Putative GTP-binding protein, Gtr1, associated with the function of the Pho84 inorganic phosphate transporter in Saccharomyces cerevisiae. Mol Cell Biol 1992;12:2958-2966.
7499430 Cloning of a novel family of mammalian GTP-binding proteins (RagA, RagBs, RagB1) with remote similarity to the Ras-related GTPases. J Biol Chem 1995;270:28982-28988.
10388807 Saccharomyces cerevisiae putative G protein, Gtr1p, which forms complexes with itself and a novel protein designated as Gtr2p, negatively regulates the Ran/Gsp1p G protein cycle through Gtr2p. Genetics 1999;152:853-867.
11073942 Novel G proteins, Rag C and Rag D, interact with GTP-binding proteins, Rag A and Rag B. J Biol Chem 2001;276:7246-7257.

Dynamin_N
8939066 Dynamin GTPase, a force-generating molecular switch. Bioessays 1996;18:885-893.
2144893 Molecular cloning of the microtubule-associated mechanochemical enzyme dynamin reveals homology with a new family of GTP-binding proteins. Nature 1990;347:256-261.

SRPRB
7844142 The beta subunit of the signal recognition particle receptor is a transmembrane GTPase that anchors the alpha subunit, a peripheral membrane GTPase, to the endoplasmic reticulum membrane. J Cell Biol. 1995;128:273-282.

GTP_EFTU
9311785 Visualization of elongation factor Tu on the Escherichia coli ribosome. Nature 1997;389:403-406.

G-alpha
8073283 Structures of active conformations of Gi alpha 1 and the mechanism of GTP hydrolysis. Science 1994;265:1405-1412.
8851656 How G proteins work: a continuing story. Trends Biochem Sci 1996;21:41-44.

MMR_HSR1_Xtn

FeoB_N
8407793 Characterization of the ferrous iron uptake system of Escherichia coli. J Bacteriol 1993;175:6212-6219.

Ras
11387043 The Rab GTPase family. Genome Biol 2001;2:REVIEWS3007.

Arf
7990966 Structure of the human ADP-ribosylation factor 1 complexed with GDP. Nature 1994;372:704-708.
7759471 Structure and function of ARF proteins: Activators of cholera toxin and critical components of intracellular vesicular transport processes. J. Biol. Chem. 1995;270:12327-12330.
7770914 Arf proteins: the membrane traffic police? Trends Biochem Sci 1995;20:147-150.
1899243 Human ADP-ribosylation factors. A functionally conserved family of GTP-binding proteins. J Biol Chem 1991;266:2606-2614.

Roc

Domain	Description	Evalue	Bits	GA	Start	End
Arf	ADP-ribosylation factor family	0	156	20.30	9	178
G-alpha	G-protein alpha subunit	0.11	1	20.10	17	38
GTP_EFTU	Elongation factor Tu GTP binding domain	0.2	1	20.20	21	39
FeoB_N	Ferrous iron transport protein B	0.00034	10	21.20	22	41
MMR_HSR1	GTPase of unknown function	1.1E-09	28	24.50	22	130
Roc	Ras of Complex, Roc, domain of DAPkinase	4.6E-19	58	27.00	22	133
SRPRB	Signal recognition particle receptor beta subunit	5.4E-12	35	20.50	22	144
Dynamin_N	Dynamin family	0.0051	6	21.00	23	39
Gtr1_RagA	Gtr1/RagA G protein conserved region	1.3E-11	34	20.10	24	140
Ras	Ras family	5.3E-22	68	20.80	24	179
G-alpha	G-protein alpha subunit	5.8E-08	22	20.10	49	103
GTP_EFTU	Elongation factor Tu GTP binding domain	1.3E-07	21	20.20	61	180
Dynamin_N	Dynamin family	0.0051	6	21.00	79	121
MMR_HSR1_Xtn	C-terminal region of MMR_HSR1 domain	3.8E-06	17	35.20	105	174
Dynamin_N	Dynamin family	0.43	0	21.00	131	166
MMR_HSR1	GTPase of unknown function	0.11	2	24.50	131	176