c2pfam

AT1G29850.1 :

Domain Description Evalue Bits GA Start End
SpoU_sub_bind RNA 2'-O ribose methyltransferase substrate binding 0.27 0 22.80 7 27
dsDNA_bind Double-stranded DNA-binding domain 1.7E-33 103 25.80 9 123
KIP1 KIP1-like protein 0.0018 7 20.50 28 56
Nup188 Nucleoporin subcomplex protein binding to Pom34 2.8E-05 10 25.00 29 121
SpoU_sub_bind RNA 2'-O ribose methyltransferase substrate binding 3.4E-05 12 22.80 60 111
KIP1 KIP1-like protein 0.0054 5 20.50 99 124

129

SpoU_sub_bind
dsDNA_bind
KIP1
Nup188
SpoU_sub_bind
KIP1

References:

dsDNA_bind
11017201 Structural proteomics of an archaeon. Nat Struct Biol 2000;7:903-909.

SpoU_sub_bind

KIP1
11500547 Isolation and characterization of kinase interacting protein 1, a pollen protein that interacts with the kinase domain of PRK1, a receptor-like kinase of petunia. Plant Physiol 2001;126:1480-1492.

Nup188
11029043 Identification of a new vertebrate nucleoporin, Nup188, with the use of a novel organelle trap assay. Mol Biol Cell. 2000;11:3381-3396.
16361228 The integral membrane protein Pom34p functionally links nucleoporin subcomplexes. Genetics. 2006;172:1441-1457.

Domain	Description	Evalue	Bits	GA	Start	End
SpoU_sub_bind	RNA 2'-O ribose methyltransferase substrate binding	0.27	0	22.80	7	27
dsDNA_bind	Double-stranded DNA-binding domain	1.7E-33	103	25.80	9	123
KIP1	KIP1-like protein	0.0018	7	20.50	28	56
Nup188	Nucleoporin subcomplex protein binding to Pom34	2.8E-05	10	25.00	29	121
SpoU_sub_bind	RNA 2'-O ribose methyltransferase substrate binding	3.4E-05	12	22.80	60	111
KIP1	KIP1-like protein	0.0054	5	20.50	99	124