AT1G29900.1 :

DomainDescriptionEvalueBitsGAStartEnd
DUF4176Domain of unknown function (DUF4176)0.0013925.0097122
EpimeraseNAD dependent epimerase/dehydratase family0.000371020.60120180
B12-bindingB12 binding domain0.011628.00126182
CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domain024019.80219426
ATP-grasp_2ATP-grasp domain0.000311020.70224292
ATP-grasp_5ATP-grasp domain0.19127.60224254
ATP-graspATP-grasp domain2.3E-051420.50228397
RimKRimK-like ATP-grasp domain0.012520.40231295
Dala_Dala_lig_CD-ala D-ala ligase C-terminus1E-051521.00251394
ATP-grasp_4ATP-grasp domain2.2E-051427.00256395
CPSase_L_D3Carbamoyl-phosphate synthetase large chain, oligomerisation domain8.8E-298923.90518594
DUF4176Domain of unknown function (DUF4176)0.0045725.00647674
B12-bindingB12 binding domain0.043428.00678731
RimKRimK-like ATP-grasp domain0.0015820.40775870
CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domain013119.80777980
ATP-grasp_5ATP-grasp domain3.1E-051327.60781818
ATP-grasp_2ATP-grasp domain0.0058620.70783826
ATP-graspATP-grasp domain6.6E-113220.50786951
Dala_Dala_lig_CD-ala D-ala ligase C-terminus6.9E-102821.00804949
ATP-grasp_4ATP-grasp domain1.8E-051427.00850950
MGSMGS-like domain1.6E-206321.9010631148

 1187

DUF4176
Epimerase
B12-binding
CPSase_L_D2
ATP-grasp_2
ATP-grasp_5
ATP-grasp
RimK
Dala_Dala_lig_C
ATP-grasp_4
CPSase_L_D3
DUF4176
B12-binding
RimK
CPSase_L_D2
ATP-grasp_5
ATP-grasp_2
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
MGS


References:

ATP-grasp_2
9416615 A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity. Protein Sci 1997;6:2639-2643.

DUF4176

ATP-grasp_4

MGS
10526357 Structure classification-based assessment of CASP3 predictions for the fold recognition targets. Proteins 1999;37:88-103.

CPSase_L_D3
10089390 The structure of carbamoyl phosphate synthetase determined to 2.1 A resolution. Acta Crystallogr D Biol Crystallogr 1999;55:8-24.

B12-binding
9739092 How a protein prepares for B12 binding: structure and dynamics of the B12-binding subunit of glutamate mutase from Clostridium tetanomorphum. Structure 1998;6:1021-1033.

Dala_Dala_lig_C
9054558 D-alanine:D-alanine ligase: phosphonate and phosphinate intermediates with wild type and the Y216F mutant. Biochemistry 1997;36:2531-2538.
10908650 The molecular basis of vancomycin resistance in clinically relevant Enterococci: crystal structure of D-alanyl-D-lactate ligase (VanA). Proc Natl Acad Sci U S A 2000;97:8921-8925.
12499203 Roles of Mycobacterium smegmatis D-alanine:D-alanine ligase and D-alanine racemase in the mechanisms of action of and resistance to the peptidoglycan inhibitor D-cycloserine. Antimicrob Agents Chemother 2003;47:283-291.

Epimerase
9174344 Structural analysis of UDP-sugar binding to UDP-galactose 4-epimerase from Escherichia coli. Biochemistry 1997;36:6294-6304.

RimK
9416615 A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity. Protein Sci 1997;6:2639-2643.

ATP-grasp_5

CPSase_L_D2
7915138 Three-dimensional structure of the biotin carboxylase subunit. of acetyl-CoA carboxylase. Biochemistry 1994;33:10249-10256.
1972379 Mammalian carbamyl phosphate synthetase (CPS). DNA sequence and evolution of the CPS domain of the Syrian hamster multifunctional protein CAD. Biol Chem 1990;265:10395-10402.
10089390 The structure of carbamoyl phosphate synthetase determined to 2.1 A resolution. Acta Crystallogr D Biol Crystallogr 1999;55:8-24.

ATP-grasp
9416615 A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity. Protein Sci 1997;6:2639-2643.