c2pfam

AT1G29990.1 :

Domain Description Evalue Bits GA Start End
Bcr-Abl_Oligo Bcr-Abl oncoprotein oligomerisation domain 0.0055 7 20.90 1 30
DUF641 Plant protein of unknown function (DUF641) 0.041 5 23.10 4 36
KxDL Uncharacterized conserved protein 0.021 6 23.80 5 31
HIP1_clath_bdg Clathrin-binding domain of Huntingtin-interacting protein 1 0.0014 10 28.80 5 41
DUF1664 Protein of unknown function (DUF1664) 0.34 1 30.00 6 27
XhlA Haemolysin XhlA 0.33 2 29.10 6 28
TMPIT TMPIT-like protein 0.027 4 22.10 6 115
Spc24 Spc24 subunit of Ndc80 0.078 4 22.00 7 63
BRE1 BRE1 E3 ubiquitin ligase 0.011 6 23.40 7 38
DUF4763 Domain of unknown function (DUF4763) 0.32 1 30.10 7 41
Zwint ZW10 interactor 0.099 3 28.40 8 38
ETRAMP Malarial early transcribed membrane protein (ETRAMP) 0.19 2 25.00 14 39
Prefoldin_2 Prefoldin subunit 5.5E-26 81 21.10 15 117
RasGAP_C RasGAP C-terminus 0.021 6 22.10 21 52
Rx_N Rx N-terminal domain 1.8E-06 19 27.70 69 112
DUF1664 Protein of unknown function (DUF1664) 4.5E-05 14 30.00 69 123
DUF148 Domain of unknown function DUF148 2.1E-05 15 23.50 69 119
Cluap1 Clusterin-associated protein-1 0.002 8 24.00 69 124
Baculo_PEP_C Baculovirus polyhedron envelope protein, PEP, C terminus 0.014 6 38.00 69 120
Spc24 Spc24 subunit of Ndc80 0.00032 12 22.00 70 115
KxDL Uncharacterized conserved protein 0.014 6 23.80 71 121
Zwint ZW10 interactor 5.4E-06 17 28.40 71 123
DUF4763 Domain of unknown function (DUF4763) 4.7E-05 13 30.10 71 124
Crescentin Crescentin protein 0.00015 11 100.00 74 129
DUF641 Plant protein of unknown function (DUF641) 0.0017 9 23.10 74 127
LMBR1 LMBR1-like membrane protein 0.0049 6 24.20 75 120
ETRAMP Malarial early transcribed membrane protein (ETRAMP) 0.0017 9 25.00 77 113
RasGAP_C RasGAP C-terminus 0.00094 10 22.10 78 122
HIP1_clath_bdg Clathrin-binding domain of Huntingtin-interacting protein 1 0.013 7 28.80 80 117
XhlA Haemolysin XhlA 0.0004 11 29.10 80 124
Prefoldin Prefoldin subunit 0.016 6 23.20 84 123
BRE1 BRE1 E3 ubiquitin ligase 0.0012 10 23.40 88 129
Bcr-Abl_Oligo Bcr-Abl oncoprotein oligomerisation domain 0.068 4 20.90 98 120

129

Bcr-Abl_Oligo
DUF641
KxDL
HIP1_clath_bdg
DUF1664
XhlA
TMPIT
Spc24
BRE1
DUF4763
Zwint
ETRAMP
Prefoldin_2
RasGAP_C
Rx_N
DUF1664
DUF148
Cluap1
Baculo_PEP_C
Spc24
KxDL
Zwint
DUF4763
Crescentin
DUF641
LMBR1
ETRAMP
RasGAP_C
HIP1_clath_bdg
XhlA
Prefoldin
BRE1
Bcr-Abl_Oligo

References:

Spc24
11266451 The Ndc80p complex from Saccharomyces cerevisiae contains conserved centromere components and has a function in chromosome segregation. J Cell Biol 2001;152:349-360.

ETRAMP

DUF1664

Prefoldin_2
1748305 Primary structure of the embryo-expressed gene KE2 from the mouse H-2K region. Gene 1991;107:345-346.
7828874 YKE2, a yeast nuclear gene encoding a protein showing homology to mouse KE2 and containing a putative leucine-zipper motif. Gene 1994;151:197-201.
9463374 A novel protein complex promoting formation of functional alpha- and gamma-tubulin. EMBO J 1998;17:952-966.

Prefoldin
12456645 Structure of eukaryotic prefoldin and of its complexes with unfolded actin and the cytosolic chaperonin CCT. EMBO J 2002;21:6377-6386.

RasGAP_C

LMBR1
12032320 Disruption of a long-range cis-acting regulator for Shh causes preaxial polydactyly. Proc Natl Acad Sci U S A 2002;99:7548-7553.
11287427 Molecular cloning of a novel lipocalin-1 interacting human cell membrane receptor using phage display. J Biol Chem 2001;276:20206-20212.
11090342 Acheiropodia is caused by a genomic deletion in C7orf2, the human orthologue of the Lmbr1 gene. Am J Hum Genet 2001;68:38-45.

Rx_N

BRE1
16337599 The human homolog of yeast BRE1 functions as a transcriptional coactivator through direct activator interactions. Mol Cell. 2005;20:759-770.

DUF148

Baculo_PEP_C
8176372 Orgyia pseudotsugata baculovirus p10 and polyhedron envelope protein genes: analysis of their relative expression levels and role in polyhedron structure. J Gen Virol 1994;75:1115-1123.

Cluap1
15480429 Isolation and characterization of a novel gene CLUAP1 whose expression is frequently upregulated in colon cancer. Oncogene. 2004;23:9289-9294.

HIP1_clath_bdg

Bcr-Abl_Oligo
11780146 Structure of the Bcr-Abl oncoprotein oligomerization domain. Nat Struct Biol. 2002;9:117-120.

Crescentin

XhlA
15659065 Expression and activity of a Xenorhabdus nematophila haemolysin required for full virulence towards Manduca sexta insects. Cell Microbiol. 2005;7:209-219.

KxDL

Zwint

DUF641

DUF4763

TMPIT

Domain	Description	Evalue	Bits	GA	Start	End
Bcr-Abl_Oligo	Bcr-Abl oncoprotein oligomerisation domain	0.0055	7	20.90	1	30
DUF641	Plant protein of unknown function (DUF641)	0.041	5	23.10	4	36
KxDL	Uncharacterized conserved protein	0.021	6	23.80	5	31
HIP1_clath_bdg	Clathrin-binding domain of Huntingtin-interacting protein 1	0.0014	10	28.80	5	41
DUF1664	Protein of unknown function (DUF1664)	0.34	1	30.00	6	27
XhlA	Haemolysin XhlA	0.33	2	29.10	6	28
TMPIT	TMPIT-like protein	0.027	4	22.10	6	115
Spc24	Spc24 subunit of Ndc80	0.078	4	22.00	7	63
BRE1	BRE1 E3 ubiquitin ligase	0.011	6	23.40	7	38
DUF4763	Domain of unknown function (DUF4763)	0.32	1	30.10	7	41
Zwint	ZW10 interactor	0.099	3	28.40	8	38
ETRAMP	Malarial early transcribed membrane protein (ETRAMP)	0.19	2	25.00	14	39
Prefoldin_2	Prefoldin subunit	5.5E-26	81	21.10	15	117
RasGAP_C	RasGAP C-terminus	0.021	6	22.10	21	52
Rx_N	Rx N-terminal domain	1.8E-06	19	27.70	69	112
DUF1664	Protein of unknown function (DUF1664)	4.5E-05	14	30.00	69	123
DUF148	Domain of unknown function DUF148	2.1E-05	15	23.50	69	119
Cluap1	Clusterin-associated protein-1	0.002	8	24.00	69	124
Baculo_PEP_C	Baculovirus polyhedron envelope protein, PEP, C terminus	0.014	6	38.00	69	120
Spc24	Spc24 subunit of Ndc80	0.00032	12	22.00	70	115
KxDL	Uncharacterized conserved protein	0.014	6	23.80	71	121
Zwint	ZW10 interactor	5.4E-06	17	28.40	71	123
DUF4763	Domain of unknown function (DUF4763)	4.7E-05	13	30.10	71	124
Crescentin	Crescentin protein	0.00015	11	100.00	74	129
DUF641	Plant protein of unknown function (DUF641)	0.0017	9	23.10	74	127
LMBR1	LMBR1-like membrane protein	0.0049	6	24.20	75	120
ETRAMP	Malarial early transcribed membrane protein (ETRAMP)	0.0017	9	25.00	77	113
RasGAP_C	RasGAP C-terminus	0.00094	10	22.10	78	122
HIP1_clath_bdg	Clathrin-binding domain of Huntingtin-interacting protein 1	0.013	7	28.80	80	117
XhlA	Haemolysin XhlA	0.0004	11	29.10	80	124
Prefoldin	Prefoldin subunit	0.016	6	23.20	84	123
BRE1	BRE1 E3 ubiquitin ligase	0.0012	10	23.40	88	129
Bcr-Abl_Oligo	Bcr-Abl oncoprotein oligomerisation domain	0.068	4	20.90	98	120