c2pfam

AT4G06634.1 :

Domain Description Evalue Bits GA Start End
zf-C2H2_8 C2H2-type zinc ribbon 0.0002 11 30.00 74 128
zf-C2H2_aberr Aberrant zinc-finger 0.0013 8 27.00 76 100
zf-C2H2_4 C2H2-type zinc finger 6.9E-05 13 27.00 79 103
zf-TRAF TRAF-type zinc finger 0.63 0 20.90 80 99
CHORD CHORD 0.24 2 21.10 80 94
FOXP-CC FOXP coiled-coil domain 0.029 5 28.90 81 103
zf-CGNR CGNR zinc finger 0.019 4 20.80 81 95
zf-C2H2 Zinc finger, C2H2 type 0.00012 12 20.80 81 103
zf-H2C2_2 Zinc-finger double domain 0.00082 9 40.00 96 119
zf-C2H2_aberr Aberrant zinc-finger 0.16 2 27.00 108 125
zf-C2H2 Zinc finger, C2H2 type 5.8E-06 16 20.80 108 132
zf-C2H2_4 C2H2-type zinc finger 5.1E-05 14 27.00 108 132
zf-CGNR CGNR zinc finger 0.0022 7 20.80 109 125
FOXP-CC FOXP coiled-coil domain 0.55 1 28.90 109 129
CHORD CHORD 0.013 6 21.10 109 133
zf-C2H2_8 C2H2-type zinc ribbon 0.015 5 30.00 110 190
zf-TRAF TRAF-type zinc finger 0.00038 11 20.90 110 150
zf-H2C2_5 C2H2-type zinc-finger domain 0.0048 6 27.00 122 134
zf-H2C2_2 Zinc-finger double domain 2E-05 15 40.00 125 150
zf-C2H2_aberr Aberrant zinc-finger 0.035 4 27.00 138 192
zf-C2H2_4 C2H2-type zinc finger 4.6E-06 17 27.00 138 162
zf-C2H2 Zinc finger, C2H2 type 6.7E-07 19 20.80 138 162
FOXP-CC FOXP coiled-coil domain 0.79 0 28.90 139 163
CHORD CHORD 0.066 4 21.10 140 163
zf-H2C2_2 Zinc-finger double domain 0.00012 12 40.00 154 180
zf-H2C2_5 C2H2-type zinc-finger domain 0.0064 6 27.00 154 163
zf-TRAF TRAF-type zinc finger 0.052 4 20.90 155 188
zf-C2H2 Zinc finger, C2H2 type 0.0035 8 20.80 168 193
zf-C2H2_4 C2H2-type zinc finger 0.0015 9 27.00 168 193
FOXP-CC FOXP coiled-coil domain 0.71 0 28.90 169 196
CHORD CHORD 0.012 6 21.10 170 195
zf-C2H2_aberr Aberrant zinc-finger 0.019 5 27.00 170 194
zf-H2C2_5 C2H2-type zinc-finger domain 0.57 0 27.00 185 194
zf-H2C2_2 Zinc-finger double domain 0.032 4 40.00 227 242
zf-TRAF TRAF-type zinc finger 0.19 2 20.90 229 252
zf-C2H2_4 C2H2-type zinc finger 0.0032 8 27.00 230 255
zf-C2H2 Zinc finger, C2H2 type 3.3E-05 14 20.80 230 255
zf-C2H2_aberr Aberrant zinc-finger 0.0075 6 27.00 231 261
CHORD CHORD 0.45 1 21.10 231 246
FOXP-CC FOXP coiled-coil domain 0.041 4 28.90 231 256
zf-H2C2_5 C2H2-type zinc-finger domain 0.48 0 27.00 247 256

387

zf-C2H2_8
zf-C2H2_aberr
zf-C2H2_4
zf-TRAF
CHORD
FOXP-CC
zf-CGNR
zf-C2H2
zf-H2C2_2
zf-C2H2_aberr
zf-C2H2
zf-C2H2_4
zf-CGNR
FOXP-CC
CHORD
zf-C2H2_8
zf-TRAF
zf-H2C2_5
zf-H2C2_2
zf-C2H2_aberr
zf-C2H2_4
zf-C2H2
FOXP-CC
CHORD
zf-H2C2_2
zf-H2C2_5
zf-TRAF
zf-C2H2
zf-C2H2_4
FOXP-CC
CHORD
zf-C2H2_aberr
zf-H2C2_5
zf-H2C2_2
zf-TRAF
zf-C2H2_4
zf-C2H2
zf-C2H2_aberr
CHORD
FOXP-CC
zf-H2C2_5

References:

zf-CGNR

zf-C2H2_4

FOXP-CC

zf-TRAF

zf-H2C2_2

zf-C2H2
9171100 Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins. Nucleic Acids Res 1997;25:2464-2469.
12683994 Assessment by molecular dynamics simulations of the structural determinants of DNA-binding specificity for transcription factor Sp1. J Mol Biol 2003;328:9-32.

zf-C2H2_aberr

zf-H2C2_5

zf-C2H2_8

CHORD
10571178 A novel class of eukaryotic zinc-binding proteins is required for disease resistance signaling in barley and development in C. elegans. Cell 1999;99:355-366.

Domain	Description	Evalue	Bits	GA	Start	End
zf-C2H2_8	C2H2-type zinc ribbon	0.0002	11	30.00	74	128
zf-C2H2_aberr	Aberrant zinc-finger	0.0013	8	27.00	76	100
zf-C2H2_4	C2H2-type zinc finger	6.9E-05	13	27.00	79	103
zf-TRAF	TRAF-type zinc finger	0.63	0	20.90	80	99
CHORD	CHORD	0.24	2	21.10	80	94
FOXP-CC	FOXP coiled-coil domain	0.029	5	28.90	81	103
zf-CGNR	CGNR zinc finger	0.019	4	20.80	81	95
zf-C2H2	Zinc finger, C2H2 type	0.00012	12	20.80	81	103
zf-H2C2_2	Zinc-finger double domain	0.00082	9	40.00	96	119
zf-C2H2_aberr	Aberrant zinc-finger	0.16	2	27.00	108	125
zf-C2H2	Zinc finger, C2H2 type	5.8E-06	16	20.80	108	132
zf-C2H2_4	C2H2-type zinc finger	5.1E-05	14	27.00	108	132
zf-CGNR	CGNR zinc finger	0.0022	7	20.80	109	125
FOXP-CC	FOXP coiled-coil domain	0.55	1	28.90	109	129
CHORD	CHORD	0.013	6	21.10	109	133
zf-C2H2_8	C2H2-type zinc ribbon	0.015	5	30.00	110	190
zf-TRAF	TRAF-type zinc finger	0.00038	11	20.90	110	150
zf-H2C2_5	C2H2-type zinc-finger domain	0.0048	6	27.00	122	134
zf-H2C2_2	Zinc-finger double domain	2E-05	15	40.00	125	150
zf-C2H2_aberr	Aberrant zinc-finger	0.035	4	27.00	138	192
zf-C2H2_4	C2H2-type zinc finger	4.6E-06	17	27.00	138	162
zf-C2H2	Zinc finger, C2H2 type	6.7E-07	19	20.80	138	162
FOXP-CC	FOXP coiled-coil domain	0.79	0	28.90	139	163
CHORD	CHORD	0.066	4	21.10	140	163
zf-H2C2_2	Zinc-finger double domain	0.00012	12	40.00	154	180
zf-H2C2_5	C2H2-type zinc-finger domain	0.0064	6	27.00	154	163
zf-TRAF	TRAF-type zinc finger	0.052	4	20.90	155	188
zf-C2H2	Zinc finger, C2H2 type	0.0035	8	20.80	168	193
zf-C2H2_4	C2H2-type zinc finger	0.0015	9	27.00	168	193
FOXP-CC	FOXP coiled-coil domain	0.71	0	28.90	169	196
CHORD	CHORD	0.012	6	21.10	170	195
zf-C2H2_aberr	Aberrant zinc-finger	0.019	5	27.00	170	194
zf-H2C2_5	C2H2-type zinc-finger domain	0.57	0	27.00	185	194
zf-H2C2_2	Zinc-finger double domain	0.032	4	40.00	227	242
zf-TRAF	TRAF-type zinc finger	0.19	2	20.90	229	252
zf-C2H2_4	C2H2-type zinc finger	0.0032	8	27.00	230	255
zf-C2H2	Zinc finger, C2H2 type	3.3E-05	14	20.80	230	255
zf-C2H2_aberr	Aberrant zinc-finger	0.0075	6	27.00	231	261
CHORD	CHORD	0.45	1	21.10	231	246
FOXP-CC	FOXP coiled-coil domain	0.041	4	28.90	231	256
zf-H2C2_5	C2H2-type zinc-finger domain	0.48	0	27.00	247	256