c2pfam

AT3G17609.1 :

Domain Description Evalue Bits GA Start End
Macoilin Transmembrane protein 9.4E-06 14 32.00 9 130
NAM-associated No apical meristem-associated C-terminal domain 0.00016 12 27.70 9 110
TPPII_N Tripeptidyl peptidase II N terminal 3.5E-05 14 21.80 12 102
Nnf1 Nnf1 2.6E-05 15 21.80 49 113
bZIP_1 bZIP transcription factor 9E-16 48 22.00 63 122
YabA Initiation control protein YabA 1 0 30.00 64 72
DUF724 Protein of unknown function (DUF724) 0.00013 12 23.40 66 123
bZIP_2 Basic region leucine zipper 1.7E-13 41 21.30 66 116
bZIP_Maf bZIP Maf transcription factor 2.9E-05 15 20.70 66 122
CENP-F_leu_zip Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 6.5E-06 16 30.00 66 128
Phlebovirus_NSM Phlebovirus nonstructural protein NS-M 1E-06 18 20.40 72 123
DUF4407 Domain of unknown function (DUF4407) 0.00078 9 31.30 77 125
DivIC Septum formation initiator 7.2E-05 13 24.00 79 122
YabA Initiation control protein YabA 0.0015 9 30.00 90 128
Cep57_CLD_2 Centrosome localisation domain of PPC89 6E-05 13 27.00 92 122
TSC22 TSC-22/dip/bun family 0.0015 9 25.00 98 123

135

Macoilin
NAM-associated
TPPII_N
Nnf1
bZIP_1
YabA
DUF724
bZIP_2
bZIP_Maf
CENP-F_leu_zip
Phlebovirus_NSM
DUF4407
DivIC
YabA
Cep57_CLD_2
TSC22

References:

bZIP_1

DUF724

DivIC
8113187 Characterization of a cell division gene from Bacillus subtilis that is required for vegetative and sporulation septum formation. J Bacteriol 1994;176:1451-1459.

DUF4407

TPPII_N
16006508 Molecular architecture and assembly mechanism of Drosophila tripeptidyl peptidase II. Proc Natl Acad Sci U S A. 2005;102:10135-10140.

Macoilin
17341690 An improved method for the analysis of membrane proteins by mass spectrometry. Physiol Genomics. 2007; [Epub ahead of print]

Phlebovirus_NSM

Nnf1
12455957 Nnf1p, Dsn1p, Mtw1p, and Nsl1p: a new group of proteins important for chromosome segregation in Saccharomyces cerevisiae. Eukaryot Cell 2002;1:229-240.
14633972 Hierarchical assembly of the budding yeast kinetochore from multiple subcomplexes. Genes Dev 2003;17:2902-2921.
16563186 Phylogenetic and structural analysis of centromeric DNA and kinetochore proteins. Genome Biol. 2006;7:R23.

TSC22
9388238 Solution structure of porcine delta sleep-inducing peptide immunoreactive peptide A homolog of the shortsighted gene product. J Biol Chem 1997;272:30918-30927.

YabA

NAM-associated

Cep57_CLD_2

CENP-F_leu_zip
7542657 CENP-F is a protein of the nuclear matrix that assembles onto kinetochores at late G2 and is rapidly degraded after mitosis. J Cell Biol. 1995;130:507-518.
14555653 LEK1 is a potential inhibitor of pocket protein-mediated cellular processes. J Biol Chem. 2004;279:664-676.

bZIP_Maf
11416124 Phosphorylation of mafa is essential for its transcriptional and biological properties. Mol Cell Biol 2001;21:4441-4452.

bZIP_2
11906833 bZIP transcription factors in Arabidopsis. Trends Plant Sci 2002;7:106-111.
12867624 bZIP proteins of human gammaherpesviruses. J Gen Virol 2003;84:1941-1949.
7780801 Transcription factors 1: bZIP proteins. Protein Profile 1995;2:101-168.

Domain	Description	Evalue	Bits	GA	Start	End
Macoilin	Transmembrane protein	9.4E-06	14	32.00	9	130
NAM-associated	No apical meristem-associated C-terminal domain	0.00016	12	27.70	9	110
TPPII_N	Tripeptidyl peptidase II N terminal	3.5E-05	14	21.80	12	102
Nnf1	Nnf1	2.6E-05	15	21.80	49	113
bZIP_1	bZIP transcription factor	9E-16	48	22.00	63	122
YabA	Initiation control protein YabA	1	0	30.00	64	72
DUF724	Protein of unknown function (DUF724)	0.00013	12	23.40	66	123
bZIP_2	Basic region leucine zipper	1.7E-13	41	21.30	66	116
bZIP_Maf	bZIP Maf transcription factor	2.9E-05	15	20.70	66	122
CENP-F_leu_zip	Leucine-rich repeats of kinetochore protein Cenp-F/LEK1	6.5E-06	16	30.00	66	128
Phlebovirus_NSM	Phlebovirus nonstructural protein NS-M	1E-06	18	20.40	72	123
DUF4407	Domain of unknown function (DUF4407)	0.00078	9	31.30	77	125
DivIC	Septum formation initiator	7.2E-05	13	24.00	79	122
YabA	Initiation control protein YabA	0.0015	9	30.00	90	128
Cep57_CLD_2	Centrosome localisation domain of PPC89	6E-05	13	27.00	92	122
TSC22	TSC-22/dip/bun family	0.0015	9	25.00	98	123