c2pfam

AT5G26610.1 :

Domain Description Evalue Bits GA Start End
G-patch G-patch domain 2.1E-19 59 20.30 67 107
G-patch_2 G-patch domain 1.7E-08 24 21.30 68 110
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 5.2E-06 16 26.90 128 190
zf-C2H2_aberr Aberrant zinc-finger 4.4E-05 13 27.00 153 192
zf-DBF DBF zinc finger 4.4E-05 13 24.80 159 186
zf-met Zinc-finger of C2H2 type 0.0001 12 21.20 161 182
zf-C2H2_4 C2H2-type zinc finger 0.00014 12 27.00 161 181
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 7.8E-10 28 22.60 161 188
PCNP PEST, proteolytic signal-containing nuclear protein family 1.7E-05 15 27.00 206 300
G-patch_2 G-patch domain 0.47 0 21.30 232 244

301

G-patch
G-patch_2
zf-C2H2_2
zf-C2H2_aberr
zf-DBF
zf-met
zf-C2H2_4
zf-C2H2_jaz
PCNP
G-patch_2

References:

PCNP

zf-C2H2_4

zf-C2H2_2

G-patch
10470032 G-patch: a new conserved domain in eukaryotic RNA-processing proteins and type D retroviral polyproteins. Trends Biochem Sci 1999;24:342-344.

G-patch_2

zf-met

zf-DBF
11779830 Systematic identification of novel protein domain families associated with nuclear functions. Genome Res 2002;12:47-56.

zf-C2H2_aberr

zf-C2H2_jaz
10488071 JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization. J Biol Chem. 1999;274:27399-27406.

Domain	Description	Evalue	Bits	GA	Start	End
G-patch	G-patch domain	2.1E-19	59	20.30	67	107
G-patch_2	G-patch domain	1.7E-08	24	21.30	68	110
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	5.2E-06	16	26.90	128	190
zf-C2H2_aberr	Aberrant zinc-finger	4.4E-05	13	27.00	153	192
zf-DBF	DBF zinc finger	4.4E-05	13	24.80	159	186
zf-met	Zinc-finger of C2H2 type	0.0001	12	21.20	161	182
zf-C2H2_4	C2H2-type zinc finger	0.00014	12	27.00	161	181
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	7.8E-10	28	22.60	161	188
PCNP	PEST, proteolytic signal-containing nuclear protein family	1.7E-05	15	27.00	206	300
G-patch_2	G-patch domain	0.47	0	21.30	232	244