c2pfam

AT1G31290.1 :

Domain Description Evalue Bits GA Start End
ArgoN N-terminal domain of argonaute 3.6E-28 88 30.90 349 479
ArgoL1 Argonaute linker 1 domain 2E-09 26 20.90 490 537
PAZ PAZ domain 4.4E-22 67 20.80 561 664
ArgoL2 Argonaute linker 2 domain 9.8E-14 40 33.30 683 729
ArgoMid Mid domain of argonaute 1.6E-07 20 27.50 748 801
Piwi Piwi domain 0 286 19.90 843 1144

1194

ArgoN
ArgoL1
PAZ
ArgoL2
ArgoMid
Piwi

References:

PAZ
11050429 Domains in gene silencing and cell differentiation proteins: the novel PAZ domain and redefinition of the Piwi domain. Trends Biochem Sci 2000;25:481-482.
14625589 The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes. Nat Struct Biol 2003;10:1026-1032.
14615802 Structure and conserved RNA binding of the PAZ domain. Nature 2003;426:468-474.
14615801 Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain. Nature 2003;426:465-469.

ArgoN

ArgoMid

ArgoL2

ArgoL1

Piwi
11050429 Domains in gene silencing and cell differentiation proteins: the novel PAZ domain and redefinition of the Piwi domain. Trends Biochem Sci 2000;25:481-482.
15284453 Crystal structure of Argonaute and its implications for RISC slicer activity. Science 2004;305:1434-1437.

Domain	Description	Evalue	Bits	GA	Start	End
ArgoN	N-terminal domain of argonaute	3.6E-28	88	30.90	349	479
ArgoL1	Argonaute linker 1 domain	2E-09	26	20.90	490	537
PAZ	PAZ domain	4.4E-22	67	20.80	561	664
ArgoL2	Argonaute linker 2 domain	9.8E-14	40	33.30	683	729
ArgoMid	Mid domain of argonaute	1.6E-07	20	27.50	748	801
Piwi	Piwi domain	0	286	19.90	843	1144