c2pfam

AT1G31360.1 :

Domain Description Evalue Bits GA Start End
ResIII Type III restriction enzyme, res subunit 1.5E-08 24 20.90 90 255
DEAD DEAD/DEAH box helicase 7.3E-23 70 20.60 92 260
Helicase_C Helicase conserved C-terminal domain 0.43 0 20.90 124 181
DEAD DEAD/DEAH box helicase 0.081 1 20.60 292 327
Helicase_C Helicase conserved C-terminal domain 5.2E-20 61 20.90 303 407
RecQ_Zn_bind RecQ zinc-binding 1E-15 47 25.00 420 476
RQC RQC domain 9E-09 24 21.00 482 586
HRDC HRDC domain 4.1E-12 35 20.40 600 660

705

ResIII
DEAD
Helicase_C
DEAD
Helicase_C
RecQ_Zn_bind
RQC
HRDC

References:

ResIII

DEAD
10322435 Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 1999;24:192-198.
9862990 The DEAD box RNA helicase family in Arabidopsis thaliana. Nucleic Acids Res 1999;27:628-636.

HRDC
9397680 A putative nucleic acid-binding domain in Bloom's and Werner's syndrome helicases Trends Biochem Sci 1997;22:417-418.
15990871 The HRDC domain of BLM is required for the dissolution of double Holliday junctions. EMBO J. 2005;24:2679-2687.
10647186 The three-dimensional structure of the HRDC domain and implications for the Werner and Bloom syndrome proteins. Structure. 1999;7:1557-1566.
17085080 Three tandem HRDC domains have synergistic effect on the RecQ functions in Deinococcus radiodurans. DNA Repair (Amst). 2006; [Epub ahead of print]

Helicase_C

RQC
16530788 A conserved G4 DNA binding domain in RecQ family helicases. J Mol Biol. 2006;358:1071-1080.

RecQ_Zn_bind

Domain	Description	Evalue	Bits	GA	Start	End
ResIII	Type III restriction enzyme, res subunit	1.5E-08	24	20.90	90	255
DEAD	DEAD/DEAH box helicase	7.3E-23	70	20.60	92	260
Helicase_C	Helicase conserved C-terminal domain	0.43	0	20.90	124	181
DEAD	DEAD/DEAH box helicase	0.081	1	20.60	292	327
Helicase_C	Helicase conserved C-terminal domain	5.2E-20	61	20.90	303	407
RecQ_Zn_bind	RecQ zinc-binding	1E-15	47	25.00	420	476
RQC	RQC domain	9E-09	24	21.00	482	586
HRDC	HRDC domain	4.1E-12	35	20.40	600	660