c2pfam

AT1G31770.1 :

Domain Description Evalue Bits GA Start End
ABC_tran ABC transporter 6.4E-27 85 23.10 82 232
AAA_25 AAA domain 0.00011 12 27.00 85 113
RsgA_GTPase RsgA GTPase 0.00011 12 30.00 90 116
AAA_16 AAA ATPase domain 2.8E-06 18 32.60 92 250
SMC_N RecF/RecN/SMC N terminal domain 0.003 7 40.00 93 112
AAA_22 AAA domain 0.00029 11 27.00 94 117
AAA_29 P-loop containing region of AAA domain 3.6E-05 13 27.00 94 112
AAA_21 AAA domain, putative AbiEii toxin, Type IV TA system 8.8E-05 12 27.00 96 123
AAA_23 AAA domain 0.00025 11 27.00 98 114
SMC_N RecF/RecN/SMC N terminal domain 0.00062 9 40.00 204 267
AAA_21 AAA domain, putative AbiEii toxin, Type IV TA system 1.3E-06 18 27.00 222 259
ABC2_membrane_7 ABC-2 type transporter 1.1E-16 50 22.70 261 377
ABC2_membrane ABC-2 type transporter 0 129 25.50 384 590
ABC2_membrane_3 ABC-2 family transporter protein 6E-09 25 31.60 435 638
ABC2_membrane_7 ABC-2 type transporter 3.4E-06 16 22.70 451 641
Phage_holin_7_1 Mycobacterial 2 TMS Phage Holin (M2 Hol) Family 2.5E-05 14 27.80 490 547

648

ABC_tran
AAA_25
RsgA_GTPase
AAA_16
SMC_N
AAA_22
AAA_29
AAA_21
AAA_23
SMC_N
AAA_21
ABC2_membrane_7
ABC2_membrane
ABC2_membrane_3
ABC2_membrane_7
Phage_holin_7_1

References:

AAA_16

Phage_holin_7_1

ABC_tran
1864505 Homology between proteins controlling Streptomyces fradiae tylosin resistance and ATP-binding transport. Gene 1991;102:27-32.
1977073 Structure and function of haemolysin B,P-glycoprotein and other members of a novel family of membrane translocators. Mol Microbiol 1990;4:873-880.
2229036 Binding protein-dependent transport systems. J Bioenerg Biomembr 1990;22:571-592.
9872322 Crystal structure of the ATP-binding subunit of an ABC transporter. Nature 1998;396:703-707.

RsgA_GTPase

ABC2_membrane
1303751 A new subfamily of bacterial ABC-type transport systems catalyzing export of drugs and carbohydrates. Protein Sci 1992;1:1326-1332.

ABC2_membrane_7

AAA_29

AAA_25

SMC_N
10429180 Structural maintenance of chromosomes (SMC) proteins: conserved molecular properties for multiple biological functions. Eur J Biochem 1999;263:6-13.
9640531 SMC protein complexes and higher-order chromosome dynamics. Curr Opin Cell Biol 1998;10:317-322.

AAA_23

AAA_22

AAA_21

ABC2_membrane_3

Domain	Description	Evalue	Bits	GA	Start	End
ABC_tran	ABC transporter	6.4E-27	85	23.10	82	232
AAA_25	AAA domain	0.00011	12	27.00	85	113
RsgA_GTPase	RsgA GTPase	0.00011	12	30.00	90	116
AAA_16	AAA ATPase domain	2.8E-06	18	32.60	92	250
SMC_N	RecF/RecN/SMC N terminal domain	0.003	7	40.00	93	112
AAA_22	AAA domain	0.00029	11	27.00	94	117
AAA_29	P-loop containing region of AAA domain	3.6E-05	13	27.00	94	112
AAA_21	AAA domain, putative AbiEii toxin, Type IV TA system	8.8E-05	12	27.00	96	123
AAA_23	AAA domain	0.00025	11	27.00	98	114
SMC_N	RecF/RecN/SMC N terminal domain	0.00062	9	40.00	204	267
AAA_21	AAA domain, putative AbiEii toxin, Type IV TA system	1.3E-06	18	27.00	222	259
ABC2_membrane_7	ABC-2 type transporter	1.1E-16	50	22.70	261	377
ABC2_membrane	ABC-2 type transporter	0	129	25.50	384	590
ABC2_membrane_3	ABC-2 family transporter protein	6E-09	25	31.60	435	638
ABC2_membrane_7	ABC-2 type transporter	3.4E-06	16	22.70	451	641
Phage_holin_7_1	Mycobacterial 2 TMS Phage Holin (M2 Hol) Family	2.5E-05	14	27.80	490	547