c2pfam

AT1G32750.1 :

Domain Description Evalue Bits GA Start End
TBP-binding TATA box-binding protein binding 2E-12 37 25.00 19 64
Parvo_NS1 Parvovirus non-structural protein NS1 0.76 -2 20.00 564 630
DUF3591 Protein of unknown function (DUF3591) 0 427 25.00 578 1146
Bromodomain Bromodomain 0.7 -1 21.00 616 634
Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 8.6E-08 21 23.70 661 730
ubiquitin Ubiquitin family 1.1E-10 30 20.70 663 732
Ubiquitin_5 Ubiquitin-like domain 2.1E-05 14 23.20 675 731
zf-CCHC_6 Zinc knuckle 3.1E-08 23 22.00 1399 1424
Parvo_NS1 Parvovirus non-structural protein NS1 0.00013 10 20.00 1671 1729
Bromodomain Bromodomain 1.4E-19 59 21.00 1808 1882

1919

TBP-binding
Parvo_NS1
DUF3591
Bromodomain
Rad60-SLD
ubiquitin
Ubiquitin_5
zf-CCHC_6
Parvo_NS1
Bromodomain

References:

Ubiquitin_5

ubiquitin
3041007 Structure of ubiquitin refined at 1.8 A resolution. J Mol Biol 1987;194:531-544.
8107144 Structure of tetraubiquitin shows how multiubiquitin chains can be formed. J Mol Biol 1994;236:601-609.
9654451 Structure determination of the small ubiquitin-related modifier SUMO-1. J Mol Biol 1998;280:275-286.
9857030 Crystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes. J Biol Chem 1998;273:34983-34991.
12826399 A potential proteasome-interacting motif within the ubiquitin-like domain of parkin and other proteins. Trends Biochem Sci 2003;28:280-283.

zf-CCHC_6

Bromodomain
1350857 The bromodomain: a conserved sequence found in human, Drosophila and yeast proteins. Nucleic Acids Res 1992;20:2603-2603.
9175470 The bromodomain revisited. Trends Biochem Sci 1997;22:151-153.
10365964 Structure and ligand of a histone acetyltransferase bromodomain. Nature 1999;399:491-496.

TBP-binding
9741622 Solution structure of a TBP-TAF(II)230 complex: protein mimicry of the minor groove surface of the TATA box unwound by TBP. Cell. 1998;94:573-583.

Rad60-SLD
15660128 Structures of the SUMO E1 provide mechanistic insights into SUMO activation and E2 recruitment to E1. EMBO J. 2005;24:439-451.
19363481 Molecular mimicry of SUMO promotes DNA repair. Nat Struct Mol Biol. 2009;16:509-516.

Parvo_NS1
8372437 Nuclear targeting of the parvoviral replicator molecule NS1: evidence for self-association prior to nuclear transport. Virology 1993;196:637-651.
9454701 Nonstructural protein-2 and the replication of canine parvovirus. Virology 1998;240:273-281.

DUF3591

Domain	Description	Evalue	Bits	GA	Start	End
TBP-binding	TATA box-binding protein binding	2E-12	37	25.00	19	64
Parvo_NS1	Parvovirus non-structural protein NS1	0.76	-2	20.00	564	630
DUF3591	Protein of unknown function (DUF3591)	0	427	25.00	578	1146
Bromodomain	Bromodomain	0.7	-1	21.00	616	634
Rad60-SLD	Ubiquitin-2 like Rad60 SUMO-like	8.6E-08	21	23.70	661	730
ubiquitin	Ubiquitin family	1.1E-10	30	20.70	663	732
Ubiquitin_5	Ubiquitin-like domain	2.1E-05	14	23.20	675	731
zf-CCHC_6	Zinc knuckle	3.1E-08	23	22.00	1399	1424
Parvo_NS1	Parvovirus non-structural protein NS1	0.00013	10	20.00	1671	1729
Bromodomain	Bromodomain	1.4E-19	59	21.00	1808	1882