c2pfam

AT1G33420.1 :

Domain Description Evalue Bits GA Start End
PHD_2 PHD-finger 0.021 3 28.00 108 115
Vps39_2 Vacuolar sorting protein 39 domain 2 8.4E-05 11 21.20 311 359
zf-PHD-like PHD/FYVE-zinc-finger like domain 0.89 -3 27.00 467 490
PHD PHD-finger 1.1E-12 36 27.90 606 651
zf-PHD-like PHD/FYVE-zinc-finger like domain 3.1E-05 12 27.00 608 678
PHD_2 PHD-finger 1.1E-07 20 28.00 618 651

697

PHD_2
Vps39_2
zf-PHD-like
PHD
zf-PHD-like
PHD_2

References:

Vps39_2
11062257 New component of the vacuolar class C-Vps complex couples nucleotide exchange on the Ypt7 GTPase to SNARE-dependent docking and fusion. J Cell Biol. 2000;151:551-562.
9111041 Vam2/Vps41p and Vam6/Vps39p are components of a protein complex on the vacuolar membranes and involved in the vacuolar assembly in the yeast Saccharomyces cerevisiae. J Biol Chem. 1997;272:11344-11349.
1493335 Morphological classification of the yeast vacuolar protein sorting mutants: evidence for a prevacuolar compartment in class E vps mutants. Mol Biol Cell. 1992;3:1389-1402.

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

zf-PHD-like

PHD_2

Domain	Description	Evalue	Bits	GA	Start	End
PHD_2	PHD-finger	0.021	3	28.00	108	115
Vps39_2	Vacuolar sorting protein 39 domain 2	8.4E-05	11	21.20	311	359
zf-PHD-like	PHD/FYVE-zinc-finger like domain	0.89	-3	27.00	467	490
PHD	PHD-finger	1.1E-12	36	27.90	606	651
zf-PHD-like	PHD/FYVE-zinc-finger like domain	3.1E-05	12	27.00	608	678
PHD_2	PHD-finger	1.1E-07	20	28.00	618	651