c2pfam

AT1G44900.1 :

Domain Description Evalue Bits GA Start End
MCM2_N Minichromosone maintenance protein 2 2.1E-21 66 21.30 40 142
MCM2_N Minichromosone maintenance protein 2 0.71 0 21.30 174 198
MCM_N MCM N-terminal domain 2.1E-16 50 24.90 220 312
MCM_OB MCM OB domain 0 128 24.80 319 446
Colicin-DNase DNase/tRNase domain of colicin-like bacteriocin 0.00018 12 21.50 454 502
MCM MCM2/3/5 family 0 344 25.20 487 709
Sigma54_activat Sigma-54 interaction domain 0.00013 11 20.20 540 657
Mg_chelatase Magnesium chelatase, subunit ChlI 0.071 2 20.30 541 560
AAA_5 AAA domain (dynein-related subfamily) 2.5E-09 27 20.80 544 663
AAA_3 ATPase family associated with various cellular activities (AAA) 1.7E-06 18 21.10 545 660
Mg_chelatase Magnesium chelatase, subunit ChlI 4.8E-10 29 20.30 598 689
MCM_lid MCM AAA-lid domain 2.8E-28 88 26.60 744 826
AAA_lid_2 AAA lid domain 1.3E-05 15 22.70 795 823

936

MCM2_N
MCM2_N
MCM_N
MCM_OB
Colicin-DNase
MCM
Sigma54_activat
Mg_chelatase
AAA_5
AAA_3
Mg_chelatase
MCM_lid
AAA_lid_2

References:

MCM
8332451 A common set of conserved motifs in a vast variety of putative nucleic acid-dependent ATPases including MCM proteins involved in the initiation of eukaryotic DNA replication. Nucleic Acids Res 1993;21:2541-2547.

Colicin-DNase

AAA_3
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

Sigma54_activat
11544185 Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminum fluoride: insights into activator mechanochemical action. Genes Dev 2001;15:2282-2294.
12618438 Domain Architectures of sigma(54)-Dependent Transcriptional Activators. J Bacteriol 2003;185:1757-1767.

Mg_chelatase
9359397 Mechanism and regulation of Mg-chelatase. Biochem J 1997;327:321-333.
9457877 Reconstitution of an active magnesium chelatase enzyme complex from the bchI, -D, and -H gene products of the green sulfur bacterium Chlorobium vibrioforme expressed in Escherichia coli. J Bacteriol 1998;180:699-704.

AAA_lid_2

MCM_lid

AAA_5
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

MCM2_N
16369567 The ATPase activity of MCM2-7 is dispensable for pre-RC assembly but is required for DNA unwinding. EMBO J. 2005;24:4334-4344.

MCM_OB

MCM_N

Domain	Description	Evalue	Bits	GA	Start	End
MCM2_N	Minichromosone maintenance protein 2	2.1E-21	66	21.30	40	142
MCM2_N	Minichromosone maintenance protein 2	0.71	0	21.30	174	198
MCM_N	MCM N-terminal domain	2.1E-16	50	24.90	220	312
MCM_OB	MCM OB domain	0	128	24.80	319	446
Colicin-DNase	DNase/tRNase domain of colicin-like bacteriocin	0.00018	12	21.50	454	502
MCM	MCM2/3/5 family	0	344	25.20	487	709
Sigma54_activat	Sigma-54 interaction domain	0.00013	11	20.20	540	657
Mg_chelatase	Magnesium chelatase, subunit ChlI	0.071	2	20.30	541	560
AAA_5	AAA domain (dynein-related subfamily)	2.5E-09	27	20.80	544	663
AAA_3	ATPase family associated with various cellular activities (AAA)	1.7E-06	18	21.10	545	660
Mg_chelatase	Magnesium chelatase, subunit ChlI	4.8E-10	29	20.30	598	689
MCM_lid	MCM AAA-lid domain	2.8E-28	88	26.60	744	826
AAA_lid_2	AAA lid domain	1.3E-05	15	22.70	795	823