c2pfam

AT1G04730.1 :

Domain Description Evalue Bits GA Start End
Rad17 Rad17 cell cycle checkpoint protein 0.15 2 19.70 223 253
NB-ARC NB-ARC domain 2E-05 14 23.50 320 396
Zeta_toxin Zeta toxin 2.7E-05 14 20.10 325 374
ATPase KaiC 0.00084 9 26.60 332 355
Rad17 Rad17 cell cycle checkpoint protein 4.8E-07 20 19.70 334 391
AAA_16 AAA ATPase domain 0.00011 13 32.60 335 373
AAA_25 AAA domain 0.00058 10 27.00 335 354
AAA_14 AAA domain 3.3E-07 21 27.00 337 408
AAA_22 AAA domain 1.1E-05 16 27.00 337 388
AAA_24 AAA domain 0.0001 12 27.00 339 409
AAA ATPase family associated with various cellular activities (AAA) 2.6E-15 47 20.80 340 434
AAA_33 AAA domain 7.5E-06 16 27.00 340 370
RuvB_N Holliday junction DNA helicase ruvB N-terminus 6.1E-07 20 20.00 340 366
AAA_5 AAA domain (dynein-related subfamily) 5.5E-08 23 20.80 340 435
AAA_18 AAA domain 7.4E-06 17 29.40 341 373
AAA_28 AAA domain 0.00031 11 27.00 342 367
AAA_17 AAA domain 0.00041 11 27.00 344 378
ATPase KaiC 0.75 -1 26.60 388 409
AAA_assoc_2 AAA C-terminal domain 0.00032 11 34.30 505 544
NB-ARC NB-ARC domain 0.8 -1 23.50 546 606
TMEM82 Transmembrane protein 82 0.00034 10 27.00 727 804

943

Rad17
NB-ARC
Zeta_toxin
ATPase
Rad17
AAA_16
AAA_25
AAA_14
AAA_22
AAA_24
AAA
AAA_33
RuvB_N
AAA_5
AAA_18
AAA_28
AAA_17
ATPase
AAA_assoc_2
NB-ARC
TMEM82

References:

AAA_17

AAA_16

AAA_14

NB-ARC
9545207 The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals. Curr Biol 1998;8:226-227.

AAA
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

TMEM82

AAA_5
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

RuvB_N
12423347 The RuvABC resolvasome. Eur J Biochem 2002;269:5492-5501.

Zeta_toxin
12571357 Crystal structure of the plasmid maintenance system epsilon/zeta: functional mechanism of toxin zeta and inactivation by epsilon 2 zeta 2 complex formation. Proc Natl Acad Sci U S A 2003;100:1661-1666.

AAA_assoc_2

AAA_33

ATPase

Rad17
10208430 hRAD17, a structural homolog of the Schizosaccharomyces pombe RAD17 cell cycle checkpoint gene, stimulates p53 accumulation. Oncogene 1999;18:1689-1699.

AAA_28

AAA_25

AAA_24

AAA_22

AAA_18

Domain	Description	Evalue	Bits	GA	Start	End
Rad17	Rad17 cell cycle checkpoint protein	0.15	2	19.70	223	253
NB-ARC	NB-ARC domain	2E-05	14	23.50	320	396
Zeta_toxin	Zeta toxin	2.7E-05	14	20.10	325	374
ATPase	KaiC	0.00084	9	26.60	332	355
Rad17	Rad17 cell cycle checkpoint protein	4.8E-07	20	19.70	334	391
AAA_16	AAA ATPase domain	0.00011	13	32.60	335	373
AAA_25	AAA domain	0.00058	10	27.00	335	354
AAA_14	AAA domain	3.3E-07	21	27.00	337	408
AAA_22	AAA domain	1.1E-05	16	27.00	337	388
AAA_24	AAA domain	0.0001	12	27.00	339	409
AAA	ATPase family associated with various cellular activities (AAA)	2.6E-15	47	20.80	340	434
AAA_33	AAA domain	7.5E-06	16	27.00	340	370
RuvB_N	Holliday junction DNA helicase ruvB N-terminus	6.1E-07	20	20.00	340	366
AAA_5	AAA domain (dynein-related subfamily)	5.5E-08	23	20.80	340	435
AAA_18	AAA domain	7.4E-06	17	29.40	341	373
AAA_28	AAA domain	0.00031	11	27.00	342	367
AAA_17	AAA domain	0.00041	11	27.00	344	378
ATPase	KaiC	0.75	-1	26.60	388	409
AAA_assoc_2	AAA C-terminal domain	0.00032	11	34.30	505	544
NB-ARC	NB-ARC domain	0.8	-1	23.50	546	606
TMEM82	Transmembrane protein 82	0.00034	10	27.00	727	804