c2pfam

AT1G48310.1 :

Domain Description Evalue Bits GA Start End
HARP HepA-related protein (HARP) 2.6E-05 13 25.00 87 137
TniB Bacterial TniB protein 0.89 -2 20.10 154 196
DEAD DEAD/DEAH box helicase 6.5E-05 12 20.60 174 223
ResIII Type III restriction enzyme, res subunit 2.6E-05 13 20.90 186 336
SNF2_N SNF2 family N-terminal domain 7.9E-33 102 20.10 191 427
TniB Bacterial TniB protein 1.3E-05 13 20.10 287 334
DEAD DEAD/DEAH box helicase 0.12 1 20.60 293 336
TniB Bacterial TniB protein 0.47 -2 20.10 381 401
Helicase_C Helicase conserved C-terminal domain 4.6E-20 61 20.90 475 581
ResIII Type III restriction enzyme, res subunit 0.41 -1 20.90 483 505
TniB Bacterial TniB protein 0.13 0 20.10 495 534

673

HARP
TniB
DEAD
ResIII
SNF2_N
TniB
DEAD
TniB
Helicase_C
ResIII
TniB

References:

HARP
10857751 Cloning and characterization of HARP/SMARCAL1: a prokaryotic HepA-related SNF2 helicase protein from human and mouse. Genomics 2000;65:274-282.

SNF2_N

TniB
8195081 Transposon Tn5090 of plasmid R751, which carries an integron, is related to Tn7, Mu, and the retroelements. J Bacteriol 1994;176:3257-3268.
8594337 Four genes, two ends, and a res region are involved in transposition of Tn5053: a paradigm for a novel family of transposons carrying either a mer operon or an integron. Mol Microbiol 1995;17:1189-1200.

ResIII

DEAD
10322435 Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 1999;24:192-198.
9862990 The DEAD box RNA helicase family in Arabidopsis thaliana. Nucleic Acids Res 1999;27:628-636.

Helicase_C

Domain	Description	Evalue	Bits	GA	Start	End
HARP	HepA-related protein (HARP)	2.6E-05	13	25.00	87	137
TniB	Bacterial TniB protein	0.89	-2	20.10	154	196
DEAD	DEAD/DEAH box helicase	6.5E-05	12	20.60	174	223
ResIII	Type III restriction enzyme, res subunit	2.6E-05	13	20.90	186	336
SNF2_N	SNF2 family N-terminal domain	7.9E-33	102	20.10	191	427
TniB	Bacterial TniB protein	1.3E-05	13	20.10	287	334
DEAD	DEAD/DEAH box helicase	0.12	1	20.60	293	336
TniB	Bacterial TniB protein	0.47	-2	20.10	381	401
Helicase_C	Helicase conserved C-terminal domain	4.6E-20	61	20.90	475	581
ResIII	Type III restriction enzyme, res subunit	0.41	-1	20.90	483	505
TniB	Bacterial TniB protein	0.13	0	20.10	495	534