c2pfam

AT1G50660.1 :

Domain Description Evalue Bits GA Start End
Thioredoxin_8 Thioredoxin-like 0.00022 11 27.00 206 240
TssO Type VI secretion system, TssO 0.0001 12 26.80 215 262
Cauli_DNA-bind Caulimovirus DNA-binding protein 0.11 2 21.00 215 253
LMBR1 LMBR1-like membrane protein 4.4E-06 15 24.20 238 370
IZUMO Izumo sperm-egg fusion, Ig domain-associated 0.0031 7 25.00 239 338
DUF4200 Domain of unknown function (DUF4200) 0.0011 9 29.70 240 270
Cauli_DNA-bind Caulimovirus DNA-binding protein 0.00039 10 21.00 250 325
DUF1002 Protein of unknown function (DUF1002) 0.00057 9 23.80 256 330
DUF4200 Domain of unknown function (DUF4200) 0.012 5 29.70 283 381
Thioredoxin_8 Thioredoxin-like 0.95 -1 27.00 286 314
TssO Type VI secretion system, TssO 0.41 0 26.80 287 337
XkdW XkdW protein 0.00081 9 20.60 293 329
DUF1002 Protein of unknown function (DUF1002) 0.0082 5 23.80 320 366
XkdW XkdW protein 0.0016 8 20.60 332 367
TssO Type VI secretion system, TssO 0.012 5 26.80 384 438

725

Thioredoxin_8
TssO
Cauli_DNA-bind
LMBR1
IZUMO
DUF4200
Cauli_DNA-bind
DUF1002
DUF4200
Thioredoxin_8
TssO
XkdW
DUF1002
XkdW
TssO

References:

TssO

DUF1002

XkdW

Cauli_DNA-bind

IZUMO

Thioredoxin_8

DUF4200

LMBR1
12032320 Disruption of a long-range cis-acting regulator for Shh causes preaxial polydactyly. Proc Natl Acad Sci U S A 2002;99:7548-7553.
11287427 Molecular cloning of a novel lipocalin-1 interacting human cell membrane receptor using phage display. J Biol Chem 2001;276:20206-20212.
11090342 Acheiropodia is caused by a genomic deletion in C7orf2, the human orthologue of the Lmbr1 gene. Am J Hum Genet 2001;68:38-45.

Domain	Description	Evalue	Bits	GA	Start	End
Thioredoxin_8	Thioredoxin-like	0.00022	11	27.00	206	240
TssO	Type VI secretion system, TssO	0.0001	12	26.80	215	262
Cauli_DNA-bind	Caulimovirus DNA-binding protein	0.11	2	21.00	215	253
LMBR1	LMBR1-like membrane protein	4.4E-06	15	24.20	238	370
IZUMO	Izumo sperm-egg fusion, Ig domain-associated	0.0031	7	25.00	239	338
DUF4200	Domain of unknown function (DUF4200)	0.0011	9	29.70	240	270
Cauli_DNA-bind	Caulimovirus DNA-binding protein	0.00039	10	21.00	250	325
DUF1002	Protein of unknown function (DUF1002)	0.00057	9	23.80	256	330
DUF4200	Domain of unknown function (DUF4200)	0.012	5	29.70	283	381
Thioredoxin_8	Thioredoxin-like	0.95	-1	27.00	286	314
TssO	Type VI secretion system, TssO	0.41	0	26.80	287	337
XkdW	XkdW protein	0.00081	9	20.60	293	329
DUF1002	Protein of unknown function (DUF1002)	0.0082	5	23.80	320	366
XkdW	XkdW protein	0.0016	8	20.60	332	367
TssO	Type VI secretion system, TssO	0.012	5	26.80	384	438