c2pfam

AT1G53440.1 :

Domain Description Evalue Bits GA Start End
LRR_8 Leucine rich repeat 8.6E-05 11 27.00 89 147
LRR_4 Leucine Rich repeats (2 copies) 0.0044 7 27.00 90 122
LRR_1 Leucine Rich Repeat 0.89 0 20.60 113 132
LRR_8 Leucine rich repeat 5.1E-07 18 27.00 161 219
LRR_4 Leucine Rich repeats (2 copies) 3.2E-07 20 27.00 184 224
LRR_1 Leucine Rich Repeat 0.0008 9 20.60 184 206
LRR_1 Leucine Rich Repeat 0.24 2 20.60 208 228
LRR_8 Leucine rich repeat 1.8E-06 17 27.00 208 263
LRR_4 Leucine Rich repeats (2 copies) 0.002 8 27.00 231 264
LRR_1 Leucine Rich Repeat 0.096 3 20.60 232 254
LRR_4 Leucine Rich repeats (2 copies) 0.013 5 27.00 273 293
LRR_4 Leucine Rich repeats (2 copies) 0.0005 10 27.00 279 320
LRR_8 Leucine rich repeat 2.6E-08 23 27.00 280 340
LRR_1 Leucine Rich Repeat 0.0027 8 20.60 306 327
LRR_1 Leucine Rich Repeat 0.72 0 20.60 334 346
LRR_8 Leucine rich repeat 0.48 -1 27.00 353 363
LRR_1 Leucine Rich Repeat 0.56 1 20.60 355 366
Malectin Di-glucose binding within endoplasmic reticulum 0 144 24.50 407 590
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 167 23.10 670 937
Pkinase Protein kinase domain 0 156 20.40 670 870
Pkinase_fungal Fungal protein kinase 2.3E-05 12 24.10 778 843

1035

LRR_8
LRR_4
LRR_1
LRR_8
LRR_4
LRR_1
LRR_1
LRR_8
LRR_4
LRR_1
LRR_4
LRR_4
LRR_8
LRR_1
LRR_1
LRR_8
LRR_1
Malectin
PK_Tyr_Ser-Thr
Pkinase
Pkinase_fungal

References:

LRR_8

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

PK_Tyr_Ser-Thr

Malectin
18524852 Malectin: a novel carbohydrate-binding protein of the endoplasmic reticulum and a candidate player in the early steps of protein N-glycosylation. Mol Biol Cell. 2008;19:3404-3414.

LRR_4

Pkinase_fungal

Domain	Description	Evalue	Bits	GA	Start	End
LRR_8	Leucine rich repeat	8.6E-05	11	27.00	89	147
LRR_4	Leucine Rich repeats (2 copies)	0.0044	7	27.00	90	122
LRR_1	Leucine Rich Repeat	0.89	0	20.60	113	132
LRR_8	Leucine rich repeat	5.1E-07	18	27.00	161	219
LRR_4	Leucine Rich repeats (2 copies)	3.2E-07	20	27.00	184	224
LRR_1	Leucine Rich Repeat	0.0008	9	20.60	184	206
LRR_1	Leucine Rich Repeat	0.24	2	20.60	208	228
LRR_8	Leucine rich repeat	1.8E-06	17	27.00	208	263
LRR_4	Leucine Rich repeats (2 copies)	0.002	8	27.00	231	264
LRR_1	Leucine Rich Repeat	0.096	3	20.60	232	254
LRR_4	Leucine Rich repeats (2 copies)	0.013	5	27.00	273	293
LRR_4	Leucine Rich repeats (2 copies)	0.0005	10	27.00	279	320
LRR_8	Leucine rich repeat	2.6E-08	23	27.00	280	340
LRR_1	Leucine Rich Repeat	0.0027	8	20.60	306	327
LRR_1	Leucine Rich Repeat	0.72	0	20.60	334	346
LRR_8	Leucine rich repeat	0.48	-1	27.00	353	363
LRR_1	Leucine Rich Repeat	0.56	1	20.60	355	366
Malectin	Di-glucose binding within endoplasmic reticulum	0	144	24.50	407	590
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	167	23.10	670	937
Pkinase	Protein kinase domain	0	156	20.40	670	870
Pkinase_fungal	Fungal protein kinase	2.3E-05	12	24.10	778	843