c2pfam

AT1G54490.1 :

Domain Description Evalue Bits GA Start End
XRN_N XRN 5'-3' exonuclease N-terminus 0 325 22.90 1 254
V-ATPase_G Vacuolar (H+)-ATPase G subunit 0.001 8 22.90 113 145
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.0037 6 21.40 223 274
zf-CCHC Zinc knuckle 6.5E-10 28 20.80 264 279
zf-CCHC_2 Zinc knuckle 2.9E-07 19 27.00 264 279
XRN_M Xrn1 helical domain 0 150 23.80 323 423
XRN_M Xrn1 helical domain 0 377 23.80 433 717
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.019 4 21.40 474 489

947

XRN_N
V-ATPase_G
zf-ANAPC11
zf-CCHC
zf-CCHC_2
XRN_M
XRN_M
zf-ANAPC11

References:

zf-CCHC

XRN_M

XRN_N
8781170 Requirement of S. pombe exonuclease II, a homologue of S. cerevisiae Sep1, for normal mitotic growth and viability. Curr Genet 1996;30:284-293.
10349620 Identification and developmental expression of a 5'-3' exoribonuclease from Drosophila melanogaster. Mech Dev 1998;79:51-55.
11106401 Novel features of the XRN-family in Arabidopsis: evidence that AtXRN4, one of several orthologs of nuclear Xrn2p/Rat1p, functions in the cytoplasm. Proc Natl Acad Sci U S A 2000;97:13985-13990.

zf-ANAPC11

V-ATPase_G
9872382 Structure, function and regulation of the vacuolar (H+)-ATPases. FEBS Lett 1998;440:258-263.
10748245 Structure, function and regulation of the plant vacuolar H(+)-translocating ATPase. Biochim Biophys Acta 2000;1465:17-36.

zf-CCHC_2

Domain	Description	Evalue	Bits	GA	Start	End
XRN_N	XRN 5'-3' exonuclease N-terminus	0	325	22.90	1	254
V-ATPase_G	Vacuolar (H+)-ATPase G subunit	0.001	8	22.90	113	145
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.0037	6	21.40	223	274
zf-CCHC	Zinc knuckle	6.5E-10	28	20.80	264	279
zf-CCHC_2	Zinc knuckle	2.9E-07	19	27.00	264	279
XRN_M	Xrn1 helical domain	0	150	23.80	323	423
XRN_M	Xrn1 helical domain	0	377	23.80	433	717
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.019	4	21.40	474	489