c2pfam

AT1G55460.1 :

Domain Description Evalue Bits GA Start End
zf-met Zinc-finger of C2H2 type 7.7E-05 12 21.20 26 47
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 0.00017 11 22.60 26 51
Kin17_mid Domain of Kin17 curved DNA-binding protein 0 163 25.00 52 177
MAS20 MAS20 protein import receptor 0.0005 9 21.50 144 180
MAS20 MAS20 protein import receptor 0.12 1 21.50 268 288
Kin17_mid Domain of Kin17 curved DNA-binding protein 0.78 -2 25.00 268 275
KN17_SH3 KN17 SH3-like C-terminal domain 4.1E-28 86 27.90 293 346
KOW KOW motif 0.97 -2 20.70 300 306
KOW KOW motif 0.23 0 20.70 319 329
KOW KOW motif 3.4E-06 16 20.70 358 390

411

zf-met
zf-C2H2_jaz
Kin17_mid
MAS20
MAS20
Kin17_mid
KN17_SH3
KOW
KOW
KOW

References:

Kin17_mid
10964102 Molecular cloning and characterization of the human KIN17 cDNA encoding a component of the UVC response that is conserved among metazoans. Carcinogenesis. 2000;21:1701-1710.

KOW
8987397 KOW: a novel motif linking a bacterial transcription factor with ribosomal proteins. Trends Biochem Sci 1996;21:425-426.

zf-met

KN17_SH3

MAS20

zf-C2H2_jaz
10488071 JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization. J Biol Chem. 1999;274:27399-27406.

Domain	Description	Evalue	Bits	GA	Start	End
zf-met	Zinc-finger of C2H2 type	7.7E-05	12	21.20	26	47
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	0.00017	11	22.60	26	51
Kin17_mid	Domain of Kin17 curved DNA-binding protein	0	163	25.00	52	177
MAS20	MAS20 protein import receptor	0.0005	9	21.50	144	180
MAS20	MAS20 protein import receptor	0.12	1	21.50	268	288
Kin17_mid	Domain of Kin17 curved DNA-binding protein	0.78	-2	25.00	268	275
KN17_SH3	KN17 SH3-like C-terminal domain	4.1E-28	86	27.90	293	346
KOW	KOW motif	0.97	-2	20.70	300	306
KOW	KOW motif	0.23	0	20.70	319	329
KOW	KOW motif	3.4E-06	16	20.70	358	390