AT1G55480.1 :

DomainDescriptionEvalueBitsGAStartEnd
PDZPDZ domain (Also known as DHR or GLGF)2.8E-061721.6095134
TPR_21Tetratricopeptide repeat-like domain0.87-125.50124148
ANAPC3Anaphase-promoting complex, cyclosome, subunit 36.3E-051327.20215279
TPR_2Tetratricopeptide repeat0.0016822.40223243
TPR_1Tetratricopeptide repeat0.001920.40224238
TPR_6Tetratricopeptide repeat0.021526.30224244
TPR_21Tetratricopeptide repeat-like domain3.6E-051325.50226286
TPR_16Tetratricopeptide repeat1E-072232.70227282
PPRPPR repeat0.0019825.00227241
TPR_8Tetratricopeptide repeat0.032425.70228248
TPR_19Tetratricopeptide repeat1.8E-061825.00229290
TPR_6Tetratricopeptide repeat0.0073726.30256282
TPR_1Tetratricopeptide repeat0.00055920.40256282
TPR_2Tetratricopeptide repeat0.0011922.40258282
TPR_8Tetratricopeptide repeat0.0011925.70258282
PPRPPR repeat0.17225.00262284

 335

PDZ
TPR_21
ANAPC3
TPR_2
TPR_1
TPR_6
TPR_21
TPR_16
PPR
TPR_8
TPR_19
TPR_6
TPR_1
TPR_2
TPR_8
PPR


References:

TPR_6

ANAPC3

TPR_21

TPR_8

TPR_19

PDZ
9204764 PDZ domains: targeting signalling molecules to sub-membranous sites. Bioessays 1997;19:469-479.
8674113 Crystal structures of a complexed and peptide-free membrane protein-binding domain: molecular basis of peptide recognition by PDZ. Cell. 1996;85:1067-1076.
9041651 Evidence for PDZ domains in bacteria, yeast, and plants. Protein Sci 1997;6:464-468.
19738200 Rapid evolution of functional complexity in a domain family. Sci Signal. 2009;2:ra50.

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_16

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.