c2pfam

AT1G58060.1 :

Domain Description Evalue Bits GA Start End
dsrm Double-stranded RNA binding motif 0.00013 12 21.00 411 456
DND1_DSRM double strand RNA binding domain from DEAD END PROTEIN 1 3.2E-06 17 25.70 412 491
T2SSE Type II/IV secretion system protein 0.00014 11 24.90 619 647
DEAD DEAD/DEAH box helicase 1.1E-12 38 20.60 626 786
ATPase KaiC 0.00017 10 26.60 627 659
AAA_19 AAA domain 0.00018 11 25.10 629 747
AAA_22 AAA domain 6.2E-06 16 27.00 629 778
Helicase_C Helicase conserved C-terminal domain 3E-15 46 20.90 905 1034
HA2 Helicase associated domain (HA2) 1E-20 64 21.30 1099 1198
OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 1E-26 83 29.50 1290 1387

1459

dsrm
DND1_DSRM
T2SSE
DEAD
ATPase
AAA_19
AAA_22
Helicase_C
HA2
OB_NTP_bind

References:

AAA_22

dsrm
8036511 Conserved structures and diversity of functions of RNA-binding proteins. Science 1994;265:615-621.

OB_NTP_bind

DEAD
10322435 Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 1999;24:192-198.
9862990 The DEAD box RNA helicase family in Arabidopsis thaliana. Nucleic Acids Res 1999;27:628-636.

ATPase

HA2

T2SSE

Helicase_C

DND1_DSRM

AAA_19

Domain	Description	Evalue	Bits	GA	Start	End
dsrm	Double-stranded RNA binding motif	0.00013	12	21.00	411	456
DND1_DSRM	double strand RNA binding domain from DEAD END PROTEIN 1	3.2E-06	17	25.70	412	491
T2SSE	Type II/IV secretion system protein	0.00014	11	24.90	619	647
DEAD	DEAD/DEAH box helicase	1.1E-12	38	20.60	626	786
ATPase	KaiC	0.00017	10	26.60	627	659
AAA_19	AAA domain	0.00018	11	25.10	629	747
AAA_22	AAA domain	6.2E-06	16	27.00	629	778
Helicase_C	Helicase conserved C-terminal domain	3E-15	46	20.90	905	1034
HA2	Helicase associated domain (HA2)	1E-20	64	21.30	1099	1198
OB_NTP_bind	Oligonucleotide/oligosaccharide-binding (OB)-fold	1E-26	83	29.50	1290	1387