c2pfam

AT1G59620.1 :

Domain Description Evalue Bits GA Start End
Rx_N Rx N-terminal domain 2.4E-21 66 27.70 6 86
RsgA_GTPase RsgA GTPase 5.1E-05 13 30.00 117 209
AAA_16 AAA ATPase domain 1.1E-09 29 32.60 163 239
Sigma54_activat Sigma-54 interaction domain 4.1E-05 13 20.20 164 213
NB-ARC NB-ARC domain 0 230 23.50 167 416
TsaE Threonylcarbamoyl adenosine biosynthesis protein TsaE 0.00017 11 26.60 168 210
AAA_22 AAA domain 4.4E-09 26 27.00 183 273
AAA_14 AAA domain 3.3E-07 20 27.00 184 280
NACHT NACHT domain 5.9E-05 13 20.40 186 272
AAA_33 AAA domain 0.00011 12 27.00 186 271
AAA ATPase family associated with various cellular activities (AAA) 0.00037 11 20.80 189 217
EF1G Elongation factor 1 gamma, conserved domain 0.00035 10 20.70 375 414

895

Rx_N
RsgA_GTPase
AAA_16
Sigma54_activat
NB-ARC
TsaE
AAA_22
AAA_14
NACHT
AAA_33
AAA
EF1G

References:

AAA_33

AAA_16

NB-ARC
9545207 The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals. Curr Biol 1998;8:226-227.

AAA_14

AAA
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

TsaE

EF1G

RsgA_GTPase

AAA_22

Rx_N

NACHT
10782090 The NACHT family - a new group of predicted NTPases implicated in apoptosis and MHC transcription activation. Trends Biochem Sci 2000;25:223-224.

Sigma54_activat
11544185 Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminum fluoride: insights into activator mechanochemical action. Genes Dev 2001;15:2282-2294.
12618438 Domain Architectures of sigma(54)-Dependent Transcriptional Activators. J Bacteriol 2003;185:1757-1767.

Domain	Description	Evalue	Bits	GA	Start	End
Rx_N	Rx N-terminal domain	2.4E-21	66	27.70	6	86
RsgA_GTPase	RsgA GTPase	5.1E-05	13	30.00	117	209
AAA_16	AAA ATPase domain	1.1E-09	29	32.60	163	239
Sigma54_activat	Sigma-54 interaction domain	4.1E-05	13	20.20	164	213
NB-ARC	NB-ARC domain	0	230	23.50	167	416
TsaE	Threonylcarbamoyl adenosine biosynthesis protein TsaE	0.00017	11	26.60	168	210
AAA_22	AAA domain	4.4E-09	26	27.00	183	273
AAA_14	AAA domain	3.3E-07	20	27.00	184	280
NACHT	NACHT domain	5.9E-05	13	20.40	186	272
AAA_33	AAA domain	0.00011	12	27.00	186	271
AAA	ATPase family associated with various cellular activities (AAA)	0.00037	11	20.80	189	217
EF1G	Elongation factor 1 gamma, conserved domain	0.00035	10	20.70	375	414