c2pfam

AT1G61840.1 :

Domain Description Evalue Bits GA Start End
Alliinase_C Allinase 0.0085 4 22.00 15 33
C1_2 C1 domain 3.5E-05 13 20.40 93 138
Zf_RING KIAA1045 RING finger 5.7E-06 15 30.80 107 140
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 6.3E-05 12 26.00 109 139
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 6E-05 12 27.30 111 146
PHD PHD-finger 1.2E-06 17 27.90 111 143
C1_2 C1 domain 8.5E-12 34 20.40 147 194
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 2.5E-05 13 27.30 164 195
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 0.0017 7 26.00 166 196
OrfB_Zn_ribbon Putative transposase DNA-binding domain 0.63 -1 26.30 167 187
Zf_RING KIAA1045 RING finger 0.038 3 30.80 168 196
PHD PHD-finger 0.022 4 27.90 168 194
C1_2 C1 domain 6.9E-05 12 20.40 289 328
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 1.5E-05 14 26.00 295 329
Zf_RING KIAA1045 RING finger 5.4E-07 19 30.80 298 330
PHD PHD-finger 8.5E-07 18 27.90 301 333
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.00025 10 27.30 301 330
C1_2 C1 domain 1.3E-11 34 20.40 337 384
Zf_RING KIAA1045 RING finger 5.3E-05 12 30.80 355 386
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 1.5E-06 17 27.30 356 385
OrfB_Zn_ribbon Putative transposase DNA-binding domain 0.41 0 26.30 357 380
PHD PHD-finger 0.02 4 27.90 358 384
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 0.012 5 26.00 369 386
C1_2 C1 domain 3.4E-12 36 20.40 396 440
OrfB_Zn_ribbon Putative transposase DNA-binding domain 1.7E-05 14 26.30 406 439
Alliinase_C Allinase 0.007 4 22.00 407 441
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 2E-06 16 27.30 410 441
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 3.7E-06 16 26.00 412 440
Zf_RING KIAA1045 RING finger 7.1E-05 12 30.80 412 472
PHD PHD-finger 4.4E-05 12 27.90 413 473
C1_2 C1 domain 1.4E-13 40 20.40 450 497
OrfB_Zn_ribbon Putative transposase DNA-binding domain 0.0096 5 26.30 450 481
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 2.4E-05 13 26.00 464 497
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.0015 7 27.30 466 498
PHD PHD-finger 0.02 4 27.90 468 497
C1_2 C1 domain 4.3E-13 38 20.40 535 582
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 2.1E-05 13 26.00 549 583
Zf_RING KIAA1045 RING finger 0.015 5 30.80 551 615
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 8.2E-05 11 27.30 552 584
PHD PHD-finger 0.044 3 27.90 554 615
OrfB_Zn_ribbon Putative transposase DNA-binding domain 0.75 -1 26.30 555 578
C1_2 C1 domain 2.6E-17 52 20.40 592 640
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 0.58 -1 26.00 612 641
PHD PHD-finger 0.39 0 27.90 612 644
C1_2 C1 domain 6.5E-08 22 20.40 650 692
PHD PHD-finger 0.017 4 27.90 666 699
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 0.18 1 26.00 667 693
C1_2 C1 domain 1.6E-10 30 20.40 701 750
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 0.013 5 26.00 717 751
Zf_RING KIAA1045 RING finger 0.59 -1 30.80 718 751
PHD PHD-finger 0.00015 11 27.90 721 751
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.037 3 27.30 721 751
C1_2 C1 domain 0.2 1 20.40 778 794
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 0.072 2 26.00 780 796

814

Alliinase_C
C1_2
Zf_RING
C1_1
Zn_ribbon_17
PHD
C1_2
Zn_ribbon_17
C1_1
OrfB_Zn_ribbon
Zf_RING
PHD
C1_2
C1_1
Zf_RING
PHD
Zn_ribbon_17
C1_2
Zf_RING
Zn_ribbon_17
OrfB_Zn_ribbon
PHD
C1_1
C1_2
OrfB_Zn_ribbon
Alliinase_C
Zn_ribbon_17
C1_1
Zf_RING
PHD
C1_2
OrfB_Zn_ribbon
C1_1
Zn_ribbon_17
PHD
C1_2
C1_1
Zf_RING
Zn_ribbon_17
PHD
OrfB_Zn_ribbon
C1_2
C1_1
PHD
C1_2
PHD
C1_1
C1_2
C1_1
Zf_RING
PHD
Zn_ribbon_17
C1_2
C1_1

References:

Zn_ribbon_17

OrfB_Zn_ribbon

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

Zf_RING

Alliinase_C
12235163 The active principle of garlic at atomic resolution. J Biol Chem 2002;0:0-0.

C1_2

C1_1
1862342 Crystal structure of the catalytic subunit of cyclic adenosine monophosphate-dependent protein kinase. Science. 1991;253:407-414.

Domain	Description	Evalue	Bits	GA	Start	End
Alliinase_C	Allinase	0.0085	4	22.00	15	33
C1_2	C1 domain	3.5E-05	13	20.40	93	138
Zf_RING	KIAA1045 RING finger	5.7E-06	15	30.80	107	140
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	6.3E-05	12	26.00	109	139
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	6E-05	12	27.30	111	146
PHD	PHD-finger	1.2E-06	17	27.90	111	143
C1_2	C1 domain	8.5E-12	34	20.40	147	194
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	2.5E-05	13	27.30	164	195
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	0.0017	7	26.00	166	196
OrfB_Zn_ribbon	Putative transposase DNA-binding domain	0.63	-1	26.30	167	187
Zf_RING	KIAA1045 RING finger	0.038	3	30.80	168	196
PHD	PHD-finger	0.022	4	27.90	168	194
C1_2	C1 domain	6.9E-05	12	20.40	289	328
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	1.5E-05	14	26.00	295	329
Zf_RING	KIAA1045 RING finger	5.4E-07	19	30.80	298	330
PHD	PHD-finger	8.5E-07	18	27.90	301	333
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.00025	10	27.30	301	330
C1_2	C1 domain	1.3E-11	34	20.40	337	384
Zf_RING	KIAA1045 RING finger	5.3E-05	12	30.80	355	386
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	1.5E-06	17	27.30	356	385
OrfB_Zn_ribbon	Putative transposase DNA-binding domain	0.41	0	26.30	357	380
PHD	PHD-finger	0.02	4	27.90	358	384
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	0.012	5	26.00	369	386
C1_2	C1 domain	3.4E-12	36	20.40	396	440
OrfB_Zn_ribbon	Putative transposase DNA-binding domain	1.7E-05	14	26.30	406	439
Alliinase_C	Allinase	0.007	4	22.00	407	441
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	2E-06	16	27.30	410	441
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	3.7E-06	16	26.00	412	440
Zf_RING	KIAA1045 RING finger	7.1E-05	12	30.80	412	472
PHD	PHD-finger	4.4E-05	12	27.90	413	473
C1_2	C1 domain	1.4E-13	40	20.40	450	497
OrfB_Zn_ribbon	Putative transposase DNA-binding domain	0.0096	5	26.30	450	481
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	2.4E-05	13	26.00	464	497
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.0015	7	27.30	466	498
PHD	PHD-finger	0.02	4	27.90	468	497
C1_2	C1 domain	4.3E-13	38	20.40	535	582
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	2.1E-05	13	26.00	549	583
Zf_RING	KIAA1045 RING finger	0.015	5	30.80	551	615
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	8.2E-05	11	27.30	552	584
PHD	PHD-finger	0.044	3	27.90	554	615
OrfB_Zn_ribbon	Putative transposase DNA-binding domain	0.75	-1	26.30	555	578
C1_2	C1 domain	2.6E-17	52	20.40	592	640
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	0.58	-1	26.00	612	641
PHD	PHD-finger	0.39	0	27.90	612	644
C1_2	C1 domain	6.5E-08	22	20.40	650	692
PHD	PHD-finger	0.017	4	27.90	666	699
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	0.18	1	26.00	667	693
C1_2	C1 domain	1.6E-10	30	20.40	701	750
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	0.013	5	26.00	717	751
Zf_RING	KIAA1045 RING finger	0.59	-1	30.80	718	751
PHD	PHD-finger	0.00015	11	27.90	721	751
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.037	3	27.30	721	751
C1_2	C1 domain	0.2	1	20.40	778	794
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	0.072	2	26.00	780	796